Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2219

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
2,532,159	+		Pf1N1B4_2218	0.20	-0.4
2,532,159	+		Pf1N1B4_2218	0.20	-0.3
2,532,159	+		Pf1N1B4_2218	0.20	-0.4
2,532,160	-		Pf1N1B4_2218	0.20	-0.7
2,532,160	-		Pf1N1B4_2218	0.20	-0.7
2,532,160	-		Pf1N1B4_2218	0.20	+0.3
2,532,284	+		Pf1N1B4_2218	0.33	+0.5
2,532,434	-		Pf1N1B4_2218	0.48	+0.8
2,532,497	+		Pf1N1B4_2218	0.55	+0.7
2,532,553	+		Pf1N1B4_2218	0.60	-2.3
2,532,642	+		Pf1N1B4_2218	0.70	+0.3
2,532,643	-		Pf1N1B4_2218	0.70	+1.3
2,532,643	-		Pf1N1B4_2218	0.70	-1.3
2,532,643	-		Pf1N1B4_2218	0.70	-0.2
2,532,672	+		Pf1N1B4_2218	0.73	-0.4
2,532,672	+		Pf1N1B4_2218	0.73	+1.3
2,532,672	+		Pf1N1B4_2218	0.73	-0.4
2,532,672	+		Pf1N1B4_2218	0.73	-0.1
2,532,672	+		Pf1N1B4_2218	0.73	-0.7
2,532,673	-		Pf1N1B4_2218	0.73	-1.1
2,532,673	-		Pf1N1B4_2218	0.73	+0.3
2,532,725	+		Pf1N1B4_2218	0.78	-0.1
2,532,725	+		Pf1N1B4_2218	0.78	-1.3
2,532,725	+		Pf1N1B4_2218	0.78	-1.3
2,532,725	+		Pf1N1B4_2218	0.78	+2.9
2,532,725	+		Pf1N1B4_2218	0.78	-1.3
2,532,726	-		Pf1N1B4_2218	0.78	+0.9
2,532,726	-		Pf1N1B4_2218	0.78	-0.7
2,532,726	-		Pf1N1B4_2218	0.78	+0.9
2,532,726	-		Pf1N1B4_2218	0.78	+2.3
2,532,726	-		Pf1N1B4_2218	0.78	+1.9
2,532,726	-		Pf1N1B4_2218	0.78	+0.3
2,532,726	-		Pf1N1B4_2218	0.78	-0.5
2,532,822	+		Pf1N1B4_2218	0.88	+0.3
2,532,822	+		Pf1N1B4_2218	0.88	-0.7
2,532,822	+		Pf1N1B4_2218	0.88	+1.3
2,532,823	-		Pf1N1B4_2218	0.88	+0.3
2,532,849	+				+0.3
2,532,849	+				-0.6
2,532,850	-				+0.1
2,532,850	-				-0.1
2,532,850	-				-1.1
2,532,918	+				+1.3
2,532,946	+				+1.9
2,532,946	+				+0.3
2,532,947	-				+0.2
2,532,954	+				-0.7
2,532,956	+				-0.4
2,532,956	+				-1.3
2,532,957	-				+0.5
2,532,957	-				+0.1
2,532,984	-				-1.3
2,533,028	+				+0.2
2,533,028	+				-1.3
2,533,028	+				-1.0
2,533,028	+				-0.9
2,533,028	+				+0.9
2,533,035	+				+0.9
2,533,036	-				-0.8
2,533,055	+				-1.1
2,533,055	+				+1.6
2,533,056	-				-0.1
2,533,056	-				+0.9
2,533,072	+				+0.3
2,533,072	+				-0.2
2,533,072	+				-1.3
2,533,072	+				-1.7
2,533,072	+				-0.7
2,533,072	+				-0.0
2,533,072	+				-1.7
2,533,072	+				+0.3
2,533,072	+				-0.4
2,533,073	-				+0.3
2,533,073	-				+0.8
2,533,073	-				+0.7
2,533,073	-				-0.9
2,533,073	-				+1.3
2,533,073	-				-0.7
2,533,073	-				+0.3
2,533,073	-				-0.2
2,533,073	-				-1.1
2,533,081	+				-0.1
2,533,081	+				-1.3
2,533,082	-				+1.1
2,533,102	+				+0.3
2,533,102	+				-0.9
2,533,102	+				-1.3
2,533,103	-				-0.3
2,533,103	-				+0.3
2,533,103	-				+0.3
2,533,105	+				-0.7
2,533,105	+				+0.9
2,533,105	+				-0.4
2,533,105	+				+1.3
2,533,105	+				+0.1
2,533,105	+				+1.9
2,533,105	+				-0.7
2,533,105	+				+0.9
2,533,106	-				-0.3
2,533,106	-				+1.3
2,533,106	-				+0.3
2,533,106	-				-0.8
2,533,109	+				-2.3
2,533,110	-				+1.1
2,533,110	-				+1.9
2,533,139	-				+1.3
2,533,215	-		Pf1N1B4_2219	0.10	-0.3
2,533,215	-				+1.3
2,533,232	+		Pf1N1B4_2219	0.13	-0.7
2,533,232	+				+0.3
2,533,232	+		Pf1N1B4_2219	0.13	+1.9
2,533,233	-		Pf1N1B4_2219	0.13	-1.5
2,533,233	-		Pf1N1B4_2219	0.13	+0.3
2,533,233	-		Pf1N1B4_2219	0.13	+0.3
2,533,290	+		Pf1N1B4_2219	0.22	-0.7
2,533,290	+		Pf1N1B4_2219	0.22	-0.7
2,533,290	+		Pf1N1B4_2219	0.22	+0.3
2,533,356	+		Pf1N1B4_2219	0.31	+1.9
2,533,357	-		Pf1N1B4_2219	0.32	+0.5
2,533,371	+		Pf1N1B4_2219	0.34	-2.0
2,533,371	+		Pf1N1B4_2219	0.34	-1.7
2,533,372	-		Pf1N1B4_2219	0.34	-1.7
2,533,620	+		Pf1N1B4_2219	0.71	-0.1
2,533,620	+		Pf1N1B4_2219	0.71	-2.0
2,533,620	+		Pf1N1B4_2219	0.71	-0.5
2,533,620	+		Pf1N1B4_2219	0.71	-0.6
2,533,698	+		Pf1N1B4_2219	0.83	-1.6
2,533,698	+		Pf1N1B4_2219	0.83	+0.3
2,533,699	-		Pf1N1B4_2219	0.83	+0.3
2,533,727	+		Pf1N1B4_2219	0.87	-0.7
2,533,776	-				-0.3
2,533,776	-				+0.8
2,533,911	+				-2.3
2,533,911	+				-0.7
2,533,912	-				+0.6
2,533,912	-				+0.3
2,533,912	-				+1.3
2,533,923	+				+1.8
2,533,963	-		Pf1N1B4_2220	0.13	+0.3
2,534,055	+		Pf1N1B4_2220	0.20	+0.3
2,534,055	+		Pf1N1B4_2220	0.20	-0.3
2,534,055	+		Pf1N1B4_2220	0.20	-1.7
2,534,055	+		Pf1N1B4_2220	0.20	+0.7
2,534,056	-		Pf1N1B4_2220	0.20	+1.3
2,534,056	-		Pf1N1B4_2220	0.20	+1.3
2,534,056	-		Pf1N1B4_2220	0.20	+1.5
2,534,125	-		Pf1N1B4_2220	0.25	-0.5
2,534,217	-		Pf1N1B4_2220	0.32	-1.1
2,534,217	-		Pf1N1B4_2220	0.32	-0.3
2,534,248	-		Pf1N1B4_2220	0.34	-1.5
2,534,256	+		Pf1N1B4_2220	0.35	-0.1
2,534,256	+		Pf1N1B4_2220	0.35	+1.3
2,534,256	+		Pf1N1B4_2220	0.35	-0.1
2,534,256	+		Pf1N1B4_2220	0.35	-1.7
2,534,256	+		Pf1N1B4_2220	0.35	-0.7
2,534,256	+		Pf1N1B4_2220	0.35	-0.1
2,534,257	-		Pf1N1B4_2220	0.35	+0.3
2,534,257	-		Pf1N1B4_2220	0.35	+0.9
2,534,257	-				+0.9
2,534,304	+		Pf1N1B4_2220	0.38	+0.3
2,534,305	-		Pf1N1B4_2220	0.38	+0.3
2,534,305	-		Pf1N1B4_2220	0.38	+0.9
2,534,343	+		Pf1N1B4_2220	0.41	+0.6
2,534,344	-		Pf1N1B4_2220	0.41	-0.5
2,534,344	-		Pf1N1B4_2220	0.41	-0.3
2,534,344	-		Pf1N1B4_2220	0.41	-0.3
2,534,397	+		Pf1N1B4_2220	0.45	+1.6
2,534,397	+		Pf1N1B4_2220	0.45	+0.5
2,534,397	+		Pf1N1B4_2220	0.45	-0.7
2,534,397	+		Pf1N1B4_2220	0.45	-1.3
2,534,398	-				+0.9
2,534,398	-		Pf1N1B4_2220	0.45	+0.3
2,534,398	-		Pf1N1B4_2220	0.45	+1.3
2,534,398	-		Pf1N1B4_2220	0.45	+1.3
2,534,449	-		Pf1N1B4_2220	0.49	-0.7
2,534,472	+		Pf1N1B4_2220	0.51	+0.3
2,534,472	+		Pf1N1B4_2220	0.51	+0.7
2,534,472	+		Pf1N1B4_2220	0.51	-1.7
2,534,472	+		Pf1N1B4_2220	0.51	+0.0
2,534,473	-		Pf1N1B4_2220	0.51	+2.3
2,534,473	-		Pf1N1B4_2220	0.51	-1.0
2,534,473	-		Pf1N1B4_2220	0.51	-0.7
2,534,473	-		Pf1N1B4_2220	0.51	-1.0
2,534,473	-		Pf1N1B4_2220	0.51	-0.7
2,534,534	+		Pf1N1B4_2220	0.55	+1.6
2,534,534	+		Pf1N1B4_2220	0.55	+1.3
2,534,534	+		Pf1N1B4_2220	0.55	+0.3
2,534,535	-		Pf1N1B4_2220	0.55	+0.7
2,534,535	-		Pf1N1B4_2220	0.55	+0.3
2,534,565	-		Pf1N1B4_2220	0.57	-1.7
2,534,565	-		Pf1N1B4_2220	0.57	+0.3
2,534,568	+		Pf1N1B4_2220	0.58	+0.3
2,534,568	+		Pf1N1B4_2220	0.58	+1.3
2,534,568	+		Pf1N1B4_2220	0.58	-1.0
2,534,568	+		Pf1N1B4_2220	0.58	+1.7
2,534,568	+		Pf1N1B4_2220	0.58	-0.1
2,534,568	+		Pf1N1B4_2220	0.58	-0.2
2,534,568	+		Pf1N1B4_2220	0.58	-0.3
2,534,568	+		Pf1N1B4_2220	0.58	-0.7
2,534,568	+		Pf1N1B4_2220	0.58	+0.1
2,534,568	+		Pf1N1B4_2220	0.58	-1.5
2,534,569	-		Pf1N1B4_2220	0.58	-0.0
2,534,569	-		Pf1N1B4_2220	0.58	-2.0
2,534,569	-		Pf1N1B4_2220	0.58	-0.7