Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1891

Experiment: Cephalothin 2.5 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 2.5 mg/ml
2,162,664	+		Pf1N1B4_1889	0.85	-0.4
2,162,665	-		Pf1N1B4_1889	0.85	+0.3
2,162,723	+		Pf1N1B4_1889	0.90	-0.5
2,162,723	+		Pf1N1B4_1889	0.90	+0.1
2,162,723	+		Pf1N1B4_1889	0.90	-0.7
2,162,723	+		Pf1N1B4_1889	0.90	-0.9
2,162,723	+		Pf1N1B4_1889	0.90	-0.0
2,162,723	+		Pf1N1B4_1889	0.90	-0.4
2,162,723	+		Pf1N1B4_1889	0.90	-2.2
2,162,723	+		Pf1N1B4_1889	0.90	-0.2
2,162,723	+		Pf1N1B4_1889	0.90	-0.2
2,162,723	+		Pf1N1B4_1889	0.90	+0.2
2,162,723	+		Pf1N1B4_1889	0.90	-0.3
2,162,723	+		Pf1N1B4_1889	0.90	-0.1
2,162,723	+		Pf1N1B4_1889	0.90	-0.7
2,162,723	+		Pf1N1B4_1889	0.90	+0.2
2,162,723	+		Pf1N1B4_1889	0.90	-0.4
2,162,723	+		Pf1N1B4_1889	0.90	-0.4
2,162,723	+		Pf1N1B4_1889	0.90	+0.5
2,162,723	+		Pf1N1B4_1889	0.90	-0.8
2,162,723	+		Pf1N1B4_1889	0.90	+0.5
2,162,723	+		Pf1N1B4_1889	0.90	+0.3
2,162,723	+		Pf1N1B4_1889	0.90	-1.7
2,162,723	+		Pf1N1B4_1889	0.90	+0.7
2,162,723	+		Pf1N1B4_1889	0.90	+0.7
2,162,723	+		Pf1N1B4_1889	0.90	-0.6
2,162,724	-		Pf1N1B4_1889	0.90	-0.3
2,162,724	-		Pf1N1B4_1889	0.90	+1.1
2,162,724	-		Pf1N1B4_1889	0.90	-1.5
2,162,724	-		Pf1N1B4_1889	0.90	+1.8
2,162,724	-		Pf1N1B4_1889	0.90	+0.3
2,162,724	-		Pf1N1B4_1889	0.90	+0.0
2,162,724	-		Pf1N1B4_1889	0.90	+0.8
2,162,724	-		Pf1N1B4_1889	0.90	-0.9
2,162,724	-		Pf1N1B4_1889	0.90	-0.7
2,162,724	-		Pf1N1B4_1889	0.90	-1.7
2,162,724	-		Pf1N1B4_1889	0.90	-2.7
2,162,724	-		Pf1N1B4_1889	0.90	+0.8
2,162,724	-		Pf1N1B4_1889	0.90	-0.0
2,162,724	-		Pf1N1B4_1889	0.90	+1.3
2,162,724	-		Pf1N1B4_1889	0.90	-0.2
2,162,724	-		Pf1N1B4_1889	0.90	+0.2
2,162,724	-		Pf1N1B4_1889	0.90	-0.1
2,162,724	-		Pf1N1B4_1889	0.90	+0.0
2,162,724	-		Pf1N1B4_1889	0.90	-1.2
2,162,724	-		Pf1N1B4_1889	0.90	+0.3
2,162,724	-		Pf1N1B4_1889	0.90	+0.0
2,162,724	-		Pf1N1B4_1889	0.90	-0.2
2,162,724	-		Pf1N1B4_1889	0.90	-0.1
2,162,724	-		Pf1N1B4_1889	0.90	-0.3
2,162,724	-		Pf1N1B4_1889	0.90	-0.1
2,162,724	-		Pf1N1B4_1889	0.90	+0.3
2,162,724	-		Pf1N1B4_1889	0.90	-0.4
2,162,724	-		Pf1N1B4_1889	0.90	-0.3
2,162,724	-		Pf1N1B4_1889	0.90	+0.3
2,162,727	+		Pf1N1B4_1889	0.90	-0.7
2,162,727	+		Pf1N1B4_1889	0.90	-0.5
2,162,727	+		Pf1N1B4_1889	0.90	+1.5
2,162,727	+		Pf1N1B4_1889	0.90	-0.4
2,162,728	-		Pf1N1B4_1889	0.90	+0.5
2,162,728	-				+0.3
2,162,728	-		Pf1N1B4_1889	0.90	+1.2
2,162,728	-		Pf1N1B4_1889	0.90	-1.2
2,162,728	-		Pf1N1B4_1889	0.90	+0.6
2,162,738	+				+0.6
2,162,738	+				+1.0
2,162,738	+				-1.9
2,162,738	+				+0.0
2,162,739	-				+0.3
2,162,739	-				+0.6
2,162,739	-				+0.1
2,162,739	-				+0.3
2,162,739	-				+0.9
2,162,739	-				+0.3
2,162,739	-				-1.4
2,162,739	-				+1.6
2,162,739	-				+0.0
2,162,739	-				-1.2
2,162,834	+				+0.5
2,162,918	+				+0.6
2,162,953	+				-1.7
2,162,953	+				-0.3
2,162,953	+				+0.3
2,162,953	+				+1.3
2,162,953	+				+0.3
2,162,953	+				+1.9
2,162,953	+				-0.2
2,162,953	+				+0.8
2,162,953	+				+0.3
2,162,953	+				+0.3
2,162,953	+				-0.7
2,162,953	+				-0.2
2,162,953	+				-0.7
2,162,953	+				-0.1
2,162,953	+				+1.1
2,162,953	+				+0.3
2,162,953	+				-1.2
2,162,954	-				+1.3
2,162,954	-				+0.7
2,162,954	-				-1.2
2,162,972	+				+0.8
2,162,973	-				-0.1
2,162,973	-				+0.9
2,162,973	-				+0.3
2,163,201	-		Pf1N1B4_1890	0.37	+0.5
2,163,255	+		Pf1N1B4_1890	0.45	-0.9
2,163,255	+		Pf1N1B4_1890	0.45	-1.2
2,163,255	+		Pf1N1B4_1890	0.45	-2.0
2,163,256	-		Pf1N1B4_1890	0.45	+1.9
2,163,256	-		Pf1N1B4_1890	0.45	+0.2
2,163,256	-		Pf1N1B4_1890	0.45	-0.4
2,163,362	+		Pf1N1B4_1890	0.62	+0.9
2,163,362	+		Pf1N1B4_1890	0.62	-2.8
2,163,363	-		Pf1N1B4_1890	0.63	+0.3
2,163,363	-		Pf1N1B4_1890	0.63	+0.8
2,163,363	-		Pf1N1B4_1890	0.63	-0.4
2,163,509	+		Pf1N1B4_1890	0.86	+0.9
2,163,510	-		Pf1N1B4_1890	0.86	-0.7
2,163,634	+				+0.9
2,163,791	+		Pf1N1B4_1891	0.21	+0.9
2,163,792	-		Pf1N1B4_1891	0.21	-1.4
2,164,357	+		Pf1N1B4_1891	0.81	+0.9
2,164,358	-		Pf1N1B4_1891	0.81	-3.6
2,164,358	-		Pf1N1B4_1891	0.81	-1.2
2,164,485	+				+1.7
2,164,486	-				-1.2
2,164,486	-				-0.2
2,164,509	+				+0.3
2,164,509	+				-0.1
2,164,509	+				-0.5
2,164,509	+				-1.2
2,164,510	-				+0.2
2,164,510	-				-0.7
2,164,510	-				-0.2
2,164,510	-				-0.1
2,164,595	+				-1.7
2,164,595	+				-1.0
2,164,595	+				-0.4
2,164,595	+				-1.1
2,164,595	+				-0.4
2,164,595	+				+0.3
2,164,595	+				-0.4
2,164,596	-				+1.3
2,164,596	-				+0.3
2,164,596	-				+0.1
2,164,697	+		Pf1N1B4_1892	0.20	+0.3
2,164,799	-		Pf1N1B4_1892	0.33	+1.1
2,164,901	+		Pf1N1B4_1892	0.46	-0.1
2,164,902	-		Pf1N1B4_1892	0.46	-0.1
2,165,231	+		Pf1N1B4_1892	0.87	-1.2
2,165,231	+		Pf1N1B4_1892	0.87	-2.2
2,165,231	+		Pf1N1B4_1892	0.87	+0.6
2,165,231	+		Pf1N1B4_1892	0.87	-0.4
2,165,231	+		Pf1N1B4_1892	0.87	+2.2
2,165,232	-		Pf1N1B4_1892	0.87	-1.0
2,165,232	-		Pf1N1B4_1892	0.87	+0.3
2,165,232	-		Pf1N1B4_1892	0.87	+1.3
2,165,232	-		Pf1N1B4_1892	0.87	-0.7
2,165,232	-		Pf1N1B4_1892	0.87	+1.3
2,165,232	-		Pf1N1B4_1892	0.87	-0.5