Experiment: Ceftazidime 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_555 and Ac3H11_556 are separated by 51 nucleotides Ac3H11_556 and Ac3H11_557 are separated by 378 nucleotides Ac3H11_557 and Ac3H11_558 are separated by 110 nucleotides
Ac3H11_555 - Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13), at 262,218 to 263,216
_555
Ac3H11_556 - hypothetical protein, at 263,268 to 263,630
_556
Ac3H11_557 - Adenylate cyclase (EC 4.6.1.1), at 264,009 to 264,938
_557
Ac3H11_558 - Penicillin amidase (EC 3.5.1.11), at 265,049 to 267,595
_558
Position (kb) 264
265 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 263.046 kb on + strand, within Ac3H11_555 at 263.260 kb on + strand at 263.260 kb on + strand at 263.261 kb on - strand at 263.261 kb on - strand at 263.269 kb on + strand at 263.269 kb on + strand at 263.299 kb on - strand at 263.425 kb on + strand, within Ac3H11_556 at 263.425 kb on + strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.426 kb on - strand, within Ac3H11_556 at 263.452 kb on + strand, within Ac3H11_556 at 263.453 kb on - strand, within Ac3H11_556 at 263.453 kb on - strand, within Ac3H11_556 at 263.674 kb on - strand at 263.719 kb on - strand at 263.721 kb on - strand at 263.803 kb on - strand at 263.815 kb on + strand at 263.815 kb on + strand at 263.815 kb on + strand at 263.815 kb on + strand at 263.816 kb on - strand at 263.816 kb on - strand at 263.816 kb on - strand at 263.816 kb on - strand at 263.970 kb on + strand at 263.970 kb on + strand at 263.970 kb on + strand at 263.990 kb on + strand at 263.990 kb on + strand at 263.990 kb on + strand at 263.990 kb on + strand at 263.991 kb on - strand at 263.991 kb on - strand at 263.991 kb on - strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.993 kb on + strand at 263.994 kb on - strand at 263.994 kb on - strand at 263.996 kb on + strand at 263.997 kb on - strand at 263.997 kb on - strand at 264.053 kb on + strand at 264.054 kb on - strand at 264.054 kb on - strand at 264.054 kb on - strand at 264.063 kb on + strand at 264.064 kb on - strand at 264.064 kb on - strand at 264.336 kb on + strand, within Ac3H11_557 at 264.336 kb on + strand, within Ac3H11_557 at 264.501 kb on + strand, within Ac3H11_557 at 264.501 kb on + strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.502 kb on - strand, within Ac3H11_557 at 264.856 kb on + strand at 264.857 kb on - strand at 264.876 kb on - strand at 264.876 kb on - strand at 264.876 kb on - strand at 264.876 kb on - strand at 265.008 kb on - strand at 265.008 kb on - strand at 265.008 kb on - strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.121 kb on + strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.122 kb on - strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.262 kb on + strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.263 kb on - strand at 265.409 kb on + strand, within Ac3H11_558 at 265.409 kb on + strand, within Ac3H11_558 at 265.452 kb on - strand, within Ac3H11_558 at 265.477 kb on + strand, within Ac3H11_558 at 265.477 kb on + strand, within Ac3H11_558 at 265.478 kb on - strand, within Ac3H11_558 at 265.568 kb on - strand, within Ac3H11_558 at 265.688 kb on + strand, within Ac3H11_558 at 265.734 kb on - strand, within Ac3H11_558 at 265.751 kb on + strand, within Ac3H11_558 at 265.752 kb on - strand, within Ac3H11_558
Per-strain Table
Position Strand Gene LocusTag Fraction Ceftazidime 0.01 mg/ml remove 263,046 + Ac3H11_555 0.83 +0.5 263,260 + +0.5 263,260 + +1.4 263,261 - -0.7 263,261 - +0.8 263,269 + -0.0 263,269 + -0.1 263,299 - +0.2 263,425 + Ac3H11_556 0.43 -0.2 263,425 + Ac3H11_556 0.43 +0.1 263,426 - Ac3H11_556 0.44 -0.1 263,426 - Ac3H11_556 0.44 +0.3 263,426 - Ac3H11_556 0.44 -0.3 263,426 - Ac3H11_556 0.44 +0.9 263,426 - Ac3H11_556 0.44 +0.2 263,426 - Ac3H11_556 0.44 +0.1 263,426 - Ac3H11_556 0.44 +0.1 263,426 - Ac3H11_556 0.44 -2.4 263,452 + Ac3H11_556 0.51 -1.7 263,453 - Ac3H11_556 0.51 -2.0 263,453 - Ac3H11_556 0.51 +0.1 263,674 - -0.7 263,719 - -0.3 263,721 - -0.4 263,803 - +0.6 263,815 + -0.0 263,815 + +0.1 263,815 + +0.2 263,815 + -0.2 263,816 - -0.7 263,816 - +0.1 263,816 - +1.0 263,816 - -0.6 263,970 + +1.4 263,970 + +1.0 263,970 + +0.7 263,990 + +0.7 263,990 + -1.0 263,990 + -0.3 263,990 + +0.0 263,991 - -0.1 263,991 - +0.7 263,991 - -1.3 263,993 + -1.1 263,993 + -0.1 263,993 + +0.9 263,993 + -0.3 263,993 + +0.1 263,993 + -0.1 263,994 - -0.5 263,994 - +0.7 263,996 + -0.3 263,997 - -0.4 263,997 - -0.3 264,053 + +0.6 264,054 - -0.3 264,054 - -0.5 264,054 - -0.0 264,063 + +0.2 264,064 - +0.3 264,064 - +0.6 264,336 + Ac3H11_557 0.35 -0.2 264,336 + Ac3H11_557 0.35 -0.3 264,501 + Ac3H11_557 0.53 +0.4 264,501 + Ac3H11_557 0.53 +0.4 264,502 - Ac3H11_557 0.53 -0.4 264,502 - Ac3H11_557 0.53 -0.1 264,502 - Ac3H11_557 0.53 +0.2 264,502 - Ac3H11_557 0.53 -2.0 264,502 - Ac3H11_557 0.53 +3.7 264,856 + +0.4 264,857 - -0.9 264,876 - -0.7 264,876 - -0.9 264,876 - -0.5 264,876 - +0.8 265,008 - +0.7 265,008 - +0.7 265,008 - +0.6 265,121 + +0.5 265,121 + -0.6 265,121 + +0.1 265,121 + +0.5 265,121 + +0.8 265,121 + +0.3 265,121 + -0.3 265,121 + +0.5 265,121 + +0.7 265,121 + -0.7 265,121 + -0.3 265,122 - +1.9 265,122 - -0.0 265,122 - -0.5 265,122 - +0.2 265,122 - -0.6 265,122 - -0.9 265,122 - +0.2 265,262 + -1.0 265,262 + +0.5 265,262 + +0.4 265,262 + +0.0 265,262 + -0.0 265,262 + +0.0 265,263 - +0.0 265,263 - -0.5 265,263 - -1.0 265,263 - +0.3 265,263 - +1.1 265,263 - +0.8 265,409 + Ac3H11_558 0.14 +0.9 265,409 + Ac3H11_558 0.14 -1.9 265,452 - Ac3H11_558 0.16 -0.1 265,477 + Ac3H11_558 0.17 -0.6 265,477 + Ac3H11_558 0.17 -0.4 265,478 - Ac3H11_558 0.17 -0.4 265,568 - Ac3H11_558 0.20 +0.8 265,688 + Ac3H11_558 0.25 -0.5 265,734 - Ac3H11_558 0.27 +0.1 265,751 + Ac3H11_558 0.28 -1.1 265,752 - Ac3H11_558 0.28 +1.2
Or see this region's nucleotide sequence