Experiment: Ceftazidime 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_3720 and Ac3H11_3721 are separated by 583 nucleotides Ac3H11_3721 and Ac3H11_3722 are separated by 59 nucleotides
Ac3H11_3720 - Uncharacterized PLP-dependent aminotransferase YfdZ, at 79,778 to 81,004
_3720
Ac3H11_3721 - hypothetical protein, at 81,588 to 81,779
_3721
Ac3H11_3722 - Urease accessory protein UreD, at 81,839 to 82,675
_3722
Position (kb) 81
82 Strain fitness (log2 ratio) -2
-1
0
1
2 at 80.591 kb on + strand, within Ac3H11_3720 at 80.592 kb on - strand, within Ac3H11_3720 at 80.600 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.708 kb on + strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.709 kb on - strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.762 kb on + strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.763 kb on - strand, within Ac3H11_3720 at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.888 kb on + strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 80.889 kb on - strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.007 kb on + strand at 81.008 kb on - strand at 81.008 kb on - strand at 81.036 kb on + strand at 81.037 kb on - strand at 81.037 kb on - strand at 81.131 kb on + strand at 81.131 kb on + strand at 81.172 kb on + strand at 81.172 kb on + strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.173 kb on - strand at 81.203 kb on - strand at 81.203 kb on - strand at 81.203 kb on - strand at 81.214 kb on + strand at 81.215 kb on - strand at 81.215 kb on - strand at 81.215 kb on - strand at 81.215 kb on - strand at 81.299 kb on + strand at 81.299 kb on + strand at 81.300 kb on - strand at 81.325 kb on + strand at 81.368 kb on - strand at 81.389 kb on + strand at 81.390 kb on - strand at 81.390 kb on - strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.410 kb on + strand at 81.411 kb on - strand at 81.411 kb on - strand at 81.432 kb on + strand at 81.432 kb on + strand at 81.433 kb on - strand at 81.433 kb on - strand at 81.436 kb on + strand at 81.436 kb on + strand at 81.436 kb on + strand at 81.437 kb on - strand at 81.437 kb on - strand at 81.541 kb on + strand at 81.541 kb on + strand at 81.541 kb on + strand at 81.541 kb on + strand at 81.542 kb on - strand at 81.542 kb on - strand at 81.636 kb on + strand, within Ac3H11_3721 at 81.637 kb on - strand, within Ac3H11_3721 at 81.690 kb on + strand, within Ac3H11_3721 at 81.690 kb on + strand, within Ac3H11_3721 at 81.691 kb on - strand, within Ac3H11_3721 at 81.691 kb on - strand, within Ac3H11_3721 at 81.711 kb on + strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.712 kb on - strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.713 kb on + strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.714 kb on - strand, within Ac3H11_3721 at 81.779 kb on + strand at 81.779 kb on + strand at 81.779 kb on + strand at 81.779 kb on + strand at 81.779 kb on + strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.780 kb on - strand at 81.840 kb on + strand at 81.840 kb on + strand at 81.840 kb on + strand at 81.840 kb on + strand at 81.841 kb on - strand at 82.335 kb on + strand, within Ac3H11_3722 at 82.428 kb on + strand, within Ac3H11_3722 at 82.570 kb on - strand, within Ac3H11_3722 at 82.630 kb on + strand at 82.630 kb on + strand at 82.630 kb on + strand at 82.630 kb on + strand at 82.631 kb on - strand at 82.631 kb on - strand at 82.631 kb on - strand at 82.645 kb on - strand at 82.695 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Ceftazidime 0.01 mg/ml remove 80,591 + Ac3H11_3720 0.66 -0.3 80,592 - Ac3H11_3720 0.66 +0.2 80,600 + Ac3H11_3720 0.67 +0.1 80,708 + Ac3H11_3720 0.76 +0.8 80,708 + Ac3H11_3720 0.76 +0.5 80,708 + Ac3H11_3720 0.76 +1.4 80,708 + Ac3H11_3720 0.76 +0.6 80,709 - Ac3H11_3720 0.76 +0.8 80,709 - Ac3H11_3720 0.76 +0.8 80,709 - Ac3H11_3720 0.76 +0.0 80,709 - Ac3H11_3720 0.76 +0.5 80,709 - Ac3H11_3720 0.76 +0.3 80,762 + Ac3H11_3720 0.80 -0.1 80,762 + Ac3H11_3720 0.80 +0.8 80,762 + Ac3H11_3720 0.80 -0.6 80,762 + Ac3H11_3720 0.80 +0.8 80,762 + Ac3H11_3720 0.80 -0.8 80,762 + Ac3H11_3720 0.80 -0.4 80,762 + Ac3H11_3720 0.80 +0.9 80,763 - Ac3H11_3720 0.80 -2.4 80,763 - Ac3H11_3720 0.80 -0.2 80,763 - Ac3H11_3720 0.80 +0.5 80,763 - Ac3H11_3720 0.80 -0.1 80,763 - Ac3H11_3720 0.80 -0.2 80,888 + +0.0 80,888 + +0.5 80,888 + -1.0 80,888 + +1.2 80,888 + +0.5 80,888 + +0.6 80,888 + -0.4 80,889 - -0.3 80,889 - -0.3 80,889 - -0.0 80,889 - +2.0 80,889 - +0.1 80,889 - +0.5 80,889 - +0.0 81,007 + -0.6 81,007 + -0.9 81,007 + +0.1 81,007 + -0.1 81,007 + -1.0 81,008 - +0.8 81,008 - -0.3 81,036 + -1.5 81,037 - -0.2 81,037 - +0.6 81,131 + -0.3 81,131 + +0.7 81,172 + -0.2 81,172 + -1.1 81,173 - +0.0 81,173 - +1.4 81,173 - +0.1 81,173 - -0.8 81,173 - -0.5 81,203 - +0.9 81,203 - -1.3 81,203 - -0.6 81,214 + +0.3 81,215 - -0.2 81,215 - +1.0 81,215 - -1.5 81,215 - +0.7 81,299 + +0.1 81,299 + -0.3 81,300 - +0.5 81,325 + +0.5 81,368 - +0.3 81,389 + +0.2 81,390 - +0.9 81,390 - +0.1 81,410 + +0.1 81,410 + +0.0 81,410 + +0.4 81,410 + +0.4 81,410 + +0.4 81,411 - +0.5 81,411 - -0.2 81,432 + +1.4 81,432 + +0.2 81,433 - +0.7 81,433 - +0.4 81,436 + +0.2 81,436 + -0.4 81,436 + -0.1 81,437 - -1.2 81,437 - -0.3 81,541 + -0.3 81,541 + +0.4 81,541 + +0.1 81,541 + -2.1 81,542 - +1.2 81,542 - -0.9 81,636 + Ac3H11_3721 0.25 +2.4 81,637 - Ac3H11_3721 0.26 -0.3 81,690 + Ac3H11_3721 0.53 +0.7 81,690 + Ac3H11_3721 0.53 +0.2 81,691 - Ac3H11_3721 0.54 -0.6 81,691 - Ac3H11_3721 0.54 +0.9 81,711 + Ac3H11_3721 0.64 -0.6 81,712 - Ac3H11_3721 0.65 -0.3 81,712 - Ac3H11_3721 0.65 +1.0 81,712 - Ac3H11_3721 0.65 -0.6 81,712 - Ac3H11_3721 0.65 +0.8 81,712 - Ac3H11_3721 0.65 -0.6 81,712 - Ac3H11_3721 0.65 -0.3 81,713 + Ac3H11_3721 0.65 +0.6 81,713 + Ac3H11_3721 0.65 +1.5 81,713 + Ac3H11_3721 0.65 -0.8 81,713 + Ac3H11_3721 0.65 -0.3 81,713 + Ac3H11_3721 0.65 -0.4 81,713 + Ac3H11_3721 0.65 -0.0 81,713 + Ac3H11_3721 0.65 +0.0 81,714 - Ac3H11_3721 0.66 -0.2 81,714 - Ac3H11_3721 0.66 +0.6 81,714 - Ac3H11_3721 0.66 +0.1 81,714 - Ac3H11_3721 0.66 -0.7 81,714 - Ac3H11_3721 0.66 +0.3 81,714 - Ac3H11_3721 0.66 +0.5 81,779 + -1.4 81,779 + -0.9 81,779 + +0.1 81,779 + +0.2 81,779 + +0.1 81,780 - +0.2 81,780 - -0.4 81,780 - +0.7 81,780 - -0.6 81,780 - +0.7 81,840 + -1.6 81,840 + +0.6 81,840 + +0.3 81,840 + -1.0 81,841 - -0.4 82,335 + Ac3H11_3722 0.59 -0.9 82,428 + Ac3H11_3722 0.70 -0.4 82,570 - Ac3H11_3722 0.87 -1.2 82,630 + +0.8 82,630 + -0.3 82,630 + +0.5 82,630 + +0.2 82,631 - +0.0 82,631 - -0.8 82,631 - -0.5 82,645 - -0.0 82,695 + +0.4
Or see this region's nucleotide sequence