Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28780

Experiment: Vanillin 1.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillin 1.25 mM
6,263,240	+				-0.2
6,263,240	+				+0.5
6,263,241	-				+0.5
6,263,241	-				-0.2
6,263,254	+				+0.3
6,263,254	+				+0.8
6,263,254	+				-0.5
6,263,254	+				-0.1
6,263,255	-				+0.3
6,263,255	-				-0.3
6,263,351	-				-0.2
6,263,351	-				+0.7
6,263,403	+				+0.7
6,263,403	+				-1.8
6,263,403	+				+0.5
6,263,403	+				-1.8
6,263,403	+				-2.1
6,263,404	-				+0.2
6,263,419	-				-0.7
6,263,452	+				-1.2
6,263,452	+				+0.9
6,263,452	+				+0.1
6,263,452	+				+0.3
6,263,452	+				-0.7
6,263,452	+				-0.2
6,263,452	+				+1.1
6,263,452	+				-0.1
6,263,452	+				-0.5
6,263,453	-				+0.8
6,263,453	-				+0.5
6,263,453	-				-0.8
6,263,453	-				+0.5
6,263,453	-				-0.1
6,263,453	-				+1.1
6,263,453	-				-1.5
6,263,453	-				-0.1
6,263,453	-				-0.5
6,263,453	-				-1.8
6,263,464	+				+1.1
6,263,464	+				-0.1
6,263,464	+				-0.9
6,263,506	+				-1.8
6,263,506	+				-1.3
6,263,507	-				-0.7
6,263,507	-				-0.5
6,263,533	+		AO353_28775	0.14	-0.1
6,263,533	+		AO353_28775	0.14	-1.5
6,263,533	+		AO353_28775	0.14	-0.1
6,263,533	+		AO353_28775	0.14	+0.7
6,263,533	+		AO353_28775	0.14	+0.5
6,263,533	+		AO353_28775	0.14	-1.7
6,263,534	-		AO353_28775	0.15	-1.8
6,263,534	-		AO353_28775	0.15	-0.7
6,263,534	-		AO353_28775	0.15	-0.1
6,263,534	-				+0.1
6,263,534	-		AO353_28775	0.15	+1.8
6,263,534	-		AO353_28775	0.15	-0.5
6,263,534	-		AO353_28775	0.15	+0.5
6,263,552	+		AO353_28775	0.18	-0.4
6,263,552	+		AO353_28775	0.18	-2.5
6,263,626	+		AO353_28775	0.34	-0.5
6,263,627	-		AO353_28775	0.34	-0.5
6,263,630	+		AO353_28775	0.34	+0.5
6,263,630	+		AO353_28775	0.34	+0.3
6,263,630	+		AO353_28775	0.34	+0.6
6,263,630	+		AO353_28775	0.34	+1.5
6,263,631	-		AO353_28775	0.35	-1.5
6,263,631	-		AO353_28775	0.35	-0.2
6,263,631	-		AO353_28775	0.35	+0.7
6,263,665	+		AO353_28775	0.42	-1.7
6,263,735	+		AO353_28775	0.56	+0.2
6,263,735	+		AO353_28775	0.56	-0.1
6,263,735	+		AO353_28775	0.56	-1.1
6,263,735	+		AO353_28775	0.56	+0.3
6,263,735	+		AO353_28775	0.56	-1.5
6,263,736	-		AO353_28775	0.56	-1.0
6,263,736	-		AO353_28775	0.56	+0.2
6,263,736	-		AO353_28775	0.56	-1.1
6,263,736	-		AO353_28775	0.56	+0.9
6,263,736	-		AO353_28775	0.56	-0.8
6,263,736	-		AO353_28775	0.56	-1.5
6,263,957	+				-0.3
6,263,957	+				-0.2
6,263,957	+				-0.9
6,263,957	+				+0.1
6,263,957	+				+1.8
6,263,957	+				+1.1
6,263,957	+				-1.1
6,263,989	-				-2.1
6,263,989	-				-0.5
6,263,989	-				-0.2
6,263,989	-				+0.6
6,264,138	+				+0.2
6,264,138	+				+1.1
6,264,138	+				+0.3
6,264,139	-				+1.5
6,264,139	-				-0.0
6,264,139	-				+0.2
6,264,166	-				-0.1
6,264,166	-				+1.1
6,264,202	-				+1.4
6,264,202	-				-1.7
6,264,202	-				+0.5
6,264,202	-				+0.9
6,264,204	+				-0.7
6,264,205	-				+0.1
6,264,211	+				+1.1
6,264,213	+				+0.3
6,264,213	+				-1.1
6,264,213	+				-0.4
6,264,214	-				+0.5
6,264,246	-				+0.1
6,264,264	+				-1.5
6,264,265	-				+1.1
6,264,298	-		AO353_28780	0.17	-0.1
6,264,298	-		AO353_28780	0.17	-0.2
6,264,301	+		AO353_28780	0.18	+0.3
6,264,302	-		AO353_28780	0.18	-1.7
6,264,367	+		AO353_28780	0.35	-0.1
6,264,407	+		AO353_28780	0.45	-1.1
6,264,408	-		AO353_28780	0.46	+0.5
6,264,414	+		AO353_28780	0.47	-1.5
6,264,454	+		AO353_28780	0.58	-0.7
6,264,482	-		AO353_28780	0.65	-0.5
6,264,482	-		AO353_28780	0.65	-1.1
6,264,534	+		AO353_28780	0.78	-2.0
6,264,535	-		AO353_28780	0.79	-1.1
6,264,535	-		AO353_28780	0.79	-0.5
6,264,612	+				+1.1
6,264,612	+				+0.8
6,264,612	+				-1.8
6,264,612	+				+0.3
6,264,613	-				-1.5
6,264,613	-				+0.5
6,264,613	-				+0.7
6,264,613	-				-0.4
6,264,614	+				-0.0
6,264,675	+				+0.8
6,264,675	+				-1.1
6,264,675	+				+2.1
6,264,696	+				+0.5
6,264,696	+				+1.1
6,264,696	+				+0.4
6,264,696	+				-1.2
6,264,697	-				-0.1
6,264,701	+				+0.5
6,264,701	+				-1.9
6,264,701	+				+0.5
6,264,702	-				+0.0
6,264,777	+				+0.0
6,264,778	-				-0.2
6,264,778	-				-2.1
6,264,778	-				+1.1
6,264,778	-				+0.6
6,264,781	+				-2.1
6,264,782	-				+1.5
6,264,782	-				-0.5
6,264,887	+				-0.9
6,264,888	-				-1.8
6,264,902	+				-0.1
6,264,902	+				-0.5
6,264,902	+				-1.2
6,264,902	+				-1.1
6,264,903	-				-1.3
6,264,903	-				-0.9
6,264,903	-				+1.5
6,264,903	-				+1.8
6,264,952	+				+0.5
6,264,953	-				-1.5
6,264,953	-				+0.3
6,265,033	+				-0.4
6,265,033	+				-0.4
6,265,033	+				-2.0
6,265,034	-				-0.0
6,265,034	-				-1.8
6,265,055	+		AO353_28785	0.12	+0.4
6,265,056	-		AO353_28785	0.12	+0.5
6,265,056	-		AO353_28785	0.12	-0.1
6,265,084	+		AO353_28785	0.17	-0.2
6,265,084	+		AO353_28785	0.17	-0.3
6,265,084	+		AO353_28785	0.17	+0.5
6,265,086	+		AO353_28785	0.17	-1.1
6,265,087	-		AO353_28785	0.17	-0.8
6,265,097	+		AO353_28785	0.19	-0.3
6,265,097	+		AO353_28785	0.19	+0.7
6,265,144	+		AO353_28785	0.28	+2.5
6,265,172	+		AO353_28785	0.33	+1.5
6,265,172	+		AO353_28785	0.33	+0.5
6,265,172	+		AO353_28785	0.33	+0.1
6,265,172	+		AO353_28785	0.33	+0.2
6,265,172	+		AO353_28785	0.33	-0.2
6,265,173	-		AO353_28785	0.33	-1.2
6,265,173	-		AO353_28785	0.33	-0.8
6,265,173	-		AO353_28785	0.33	-0.7
6,265,173	-		AO353_28785	0.33	-0.0
6,265,173	-		AO353_28785	0.33	-1.1
6,265,173	-		AO353_28785	0.33	-0.5
6,265,173	-		AO353_28785	0.33	+2.1
6,265,173	-		AO353_28785	0.33	-1.1
6,265,242	+		AO353_28785	0.46	-1.1
6,265,243	-		AO353_28785	0.46	+0.8
6,265,249	+		AO353_28785	0.47	-2.1
6,265,249	+		AO353_28785	0.47	+1.2
6,265,249	+				+0.1
6,265,303	+		AO353_28785	0.57	+0.2
6,265,303	+		AO353_28785	0.57	-0.7
6,265,303	+		AO353_28785	0.57	+2.3
6,265,303	+		AO353_28785	0.57	-0.2
6,265,303	+		AO353_28785	0.57	-0.5
6,265,303	+		AO353_28785	0.57	-0.6
6,265,303	+		AO353_28785	0.57	-0.1
6,265,303	+		AO353_28785	0.57	-1.3
6,265,303	+		AO353_28785	0.57	-1.1
6,265,304	-		AO353_28785	0.57	+1.2
6,265,304	-		AO353_28785	0.57	-1.3
6,265,304	-		AO353_28785	0.57	-0.4
6,265,304	-		AO353_28785	0.57	-1.5
6,265,304	-		AO353_28785	0.57	-0.1
6,265,470	+		AO353_28785	0.88	-0.7
6,265,471	-		AO353_28785	0.88	-1.1
6,265,477	+		AO353_28785	0.89	+0.4
6,265,539	+				-1.1
6,265,539	+				-0.7
6,265,539	+				+0.7
6,265,539	+				-0.1
6,265,539	+				-0.8
6,265,539	+				-0.1
6,265,539	+				+0.4
6,265,539	+				+0.2
6,265,539	+				+2.8
6,265,539	+				-0.8
6,265,539	+				+1.5
6,265,539	+				+0.8
6,265,539	+				-1.3
6,265,539	+				+0.7
6,265,539	+				-0.1
6,265,540	-				-0.1
6,265,540	-				+0.1
6,265,540	-				+1.0
6,265,540	-				-0.8
6,265,540	-				-1.1
6,265,540	-				+1.0
6,265,540	-				-0.6
6,265,540	-				+2.3
6,265,540	-				+0.5
6,265,540	-				-0.7
6,265,540	-				+0.5
6,265,540	-				+0.9
6,265,540	-				-0.5
6,265,540	-				-0.2
6,265,540	-				-2.1
6,265,549	-				-1.6
6,265,549	-				+0.3
6,265,549	-				+0.9
6,265,568	+		AO353_28790	0.11	-1.1
6,265,615	+		AO353_28790	0.34	-0.1