Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2639 and DvMF_2640 are separated by 262 nucleotides DvMF_2640 and DvMF_2641 are separated by 247 nucleotides DvMF_2641 and DvMF_2642 are separated by 175 nucleotides
DvMF_2639: DvMF_2639 - hypothetical protein (RefSeq), at 3,337,135 to 3,337,593
_2639
DvMF_2640: DvMF_2640 - PAS/PAC sensor signal transduction histidine kinase (RefSeq), at 3,337,856 to 3,340,723
_2640
DvMF_2641: DvMF_2641 - twin-arginine translocation protein, TatA/E family subunit (RefSeq), at 3,340,971 to 3,341,144
_2641
DvMF_2642: DvMF_2642 - hypothetical protein (RefSeq), at 3,341,320 to 3,342,693
_2642
Position (kb)
3337
3338
3339
3340
3341 Strain fitness (log2 ratio)
-1
0
1
2 at 3336.900 kb on - strand at 3337.006 kb on + strand at 3337.238 kb on - strand, within DvMF_2639 at 3337.253 kb on - strand, within DvMF_2639 at 3337.271 kb on - strand, within DvMF_2639 at 3337.302 kb on - strand, within DvMF_2639 at 3338.012 kb on + strand at 3338.013 kb on - strand at 3338.183 kb on + strand, within DvMF_2640 at 3338.190 kb on + strand, within DvMF_2640 at 3338.323 kb on + strand, within DvMF_2640 at 3338.563 kb on - strand, within DvMF_2640 at 3338.707 kb on - strand, within DvMF_2640 at 3338.754 kb on + strand, within DvMF_2640 at 3338.804 kb on - strand, within DvMF_2640 at 3338.954 kb on + strand, within DvMF_2640 at 3339.136 kb on - strand, within DvMF_2640 at 3339.206 kb on + strand, within DvMF_2640 at 3339.214 kb on - strand, within DvMF_2640 at 3339.579 kb on - strand, within DvMF_2640 at 3339.579 kb on - strand, within DvMF_2640 at 3339.740 kb on + strand, within DvMF_2640 at 3339.905 kb on + strand, within DvMF_2640 at 3340.001 kb on + strand, within DvMF_2640 at 3340.204 kb on + strand, within DvMF_2640 at 3340.254 kb on - strand, within DvMF_2640 at 3340.349 kb on + strand, within DvMF_2640 at 3340.349 kb on + strand, within DvMF_2640 at 3340.429 kb on + strand, within DvMF_2640 at 3340.759 kb on + strand at 3341.216 kb on + strand at 3341.414 kb on + strand at 3341.482 kb on + strand, within DvMF_2642 at 3341.688 kb on + strand, within DvMF_2642 at 3341.695 kb on - strand, within DvMF_2642
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.25 % remove 3,336,900 - +0.1 3,337,006 + -0.4 3,337,238 - DvMF_2639 0.22 -0.1 3,337,253 - DvMF_2639 0.26 -0.2 3,337,271 - DvMF_2639 0.30 -1.1 3,337,302 - DvMF_2639 0.36 -0.6 3,338,012 + +1.4 3,338,013 - +2.1 3,338,183 + DvMF_2640 0.11 +1.4 3,338,190 + DvMF_2640 0.12 +1.8 3,338,323 + DvMF_2640 0.16 +1.5 3,338,563 - DvMF_2640 0.25 +1.8 3,338,707 - DvMF_2640 0.30 +1.7 3,338,754 + DvMF_2640 0.31 +1.8 3,338,804 - DvMF_2640 0.33 +1.7 3,338,954 + DvMF_2640 0.38 +1.4 3,339,136 - DvMF_2640 0.45 +1.7 3,339,206 + DvMF_2640 0.47 +1.8 3,339,214 - DvMF_2640 0.47 +1.7 3,339,579 - DvMF_2640 0.60 +1.9 3,339,579 - DvMF_2640 0.60 +1.7 3,339,740 + DvMF_2640 0.66 +1.4 3,339,905 + DvMF_2640 0.71 +2.2 3,340,001 + DvMF_2640 0.75 +1.3 3,340,204 + DvMF_2640 0.82 +1.7 3,340,254 - DvMF_2640 0.84 +1.2 3,340,349 + DvMF_2640 0.87 +1.7 3,340,349 + DvMF_2640 0.87 +1.5 3,340,429 + DvMF_2640 0.90 +2.5 3,340,759 + -0.0 3,341,216 + -0.7 3,341,414 + -0.5 3,341,482 + DvMF_2642 0.12 -0.8 3,341,688 + DvMF_2642 0.27 -0.8 3,341,695 - DvMF_2642 0.27 -0.6
Or see this region's nucleotide sequence