Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2163 and DvMF_2164 are separated by 24 nucleotides DvMF_2164 and DvMF_2165 are separated by 368 nucleotides
DvMF_2163: DvMF_2163 - transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq), at 2,696,715 to 2,699,951
_2163
DvMF_2164: DvMF_2164 - efflux transporter, RND family, MFP subunit (RefSeq), at 2,699,976 to 2,701,193
_2164
DvMF_2165: DvMF_2165 - transcriptional regulator, TetR family (RefSeq), at 2,701,562 to 2,702,353
_2165
Position (kb)
2699
2700
2701
2702 Strain fitness (log2 ratio)
-1
0
1
2
3
4
5
6
7 at 2699.168 kb on + strand, within DvMF_2163 at 2699.234 kb on + strand, within DvMF_2163 at 2699.398 kb on + strand, within DvMF_2163 at 2699.424 kb on + strand, within DvMF_2163 at 2699.595 kb on - strand, within DvMF_2163 at 2699.807 kb on - strand at 2699.907 kb on - strand at 2700.042 kb on + strand at 2700.102 kb on + strand, within DvMF_2164 at 2700.224 kb on + strand, within DvMF_2164 at 2700.224 kb on + strand, within DvMF_2164 at 2700.232 kb on - strand, within DvMF_2164 at 2700.255 kb on + strand, within DvMF_2164 at 2700.262 kb on + strand, within DvMF_2164 at 2700.340 kb on + strand, within DvMF_2164 at 2700.410 kb on + strand, within DvMF_2164 at 2700.430 kb on - strand, within DvMF_2164 at 2700.519 kb on - strand, within DvMF_2164 at 2700.596 kb on - strand, within DvMF_2164 at 2700.800 kb on - strand, within DvMF_2164 at 2700.893 kb on + strand, within DvMF_2164 at 2700.901 kb on - strand, within DvMF_2164 at 2700.901 kb on - strand, within DvMF_2164 at 2700.997 kb on - strand, within DvMF_2164 at 2701.004 kb on + strand, within DvMF_2164 at 2701.041 kb on - strand, within DvMF_2164 at 2701.090 kb on + strand at 2701.150 kb on + strand at 2701.185 kb on - strand at 2701.201 kb on + strand at 2701.268 kb on - strand at 2701.308 kb on + strand at 2701.365 kb on - strand at 2701.490 kb on - strand at 2701.559 kb on + strand at 2701.635 kb on - strand at 2701.644 kb on - strand, within DvMF_2165 at 2701.954 kb on + strand, within DvMF_2165 at 2701.981 kb on + strand, within DvMF_2165
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.25 % remove 2,699,168 + DvMF_2163 0.76 +6.2 2,699,234 + DvMF_2163 0.78 +6.8 2,699,398 + DvMF_2163 0.83 +6.5 2,699,424 + DvMF_2163 0.84 +7.4 2,699,595 - DvMF_2163 0.89 +6.5 2,699,807 - +6.4 2,699,907 - +5.5 2,700,042 + +5.5 2,700,102 + DvMF_2164 0.10 +6.7 2,700,224 + DvMF_2164 0.20 +6.3 2,700,224 + DvMF_2164 0.20 +7.2 2,700,232 - DvMF_2164 0.21 +6.4 2,700,255 + DvMF_2164 0.23 +6.7 2,700,262 + DvMF_2164 0.23 +6.8 2,700,340 + DvMF_2164 0.30 +6.4 2,700,410 + DvMF_2164 0.36 +6.3 2,700,430 - DvMF_2164 0.37 +7.0 2,700,519 - DvMF_2164 0.45 +6.3 2,700,596 - DvMF_2164 0.51 +6.4 2,700,800 - DvMF_2164 0.68 +6.4 2,700,893 + DvMF_2164 0.75 +6.3 2,700,901 - DvMF_2164 0.76 +5.9 2,700,901 - DvMF_2164 0.76 +6.3 2,700,997 - DvMF_2164 0.84 +7.0 2,701,004 + DvMF_2164 0.84 +6.3 2,701,041 - DvMF_2164 0.87 +6.8 2,701,090 + +7.5 2,701,150 + +7.2 2,701,185 - +6.4 2,701,201 + +6.0 2,701,268 - +6.1 2,701,308 + +5.7 2,701,365 - +2.4 2,701,490 - -0.5 2,701,559 + +0.1 2,701,635 - -1.3 2,701,644 - DvMF_2165 0.10 -1.5 2,701,954 + DvMF_2165 0.49 +0.1 2,701,981 + DvMF_2165 0.53 +0.0
Or see this region's nucleotide sequence