Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1925 and DvMF_1926 are separated by 434 nucleotides DvMF_1926 and DvMF_1927 are separated by 73 nucleotides DvMF_1927 and DvMF_1928 are separated by 231 nucleotides
DvMF_1925: DvMF_1925 - aminoglycoside phosphotransferase (RefSeq), at 2,373,740 to 2,375,062
_1925
DvMF_1926: DvMF_1926 - transcriptional regulator, TraR/DksA family (RefSeq), at 2,375,497 to 2,375,838
_1926
DvMF_1927: DvMF_1927 - glycosyl transferase family 2 (RefSeq), at 2,375,912 to 2,377,843
_1927
DvMF_1928: DvMF_1928 - FAD dependent oxidoreductase (RefSeq), at 2,378,075 to 2,379,457
_1928
Position (kb)
2375
2376
2377
2378 Strain fitness (log2 ratio)
-1
0
1 at 2374.973 kb on - strand at 2375.478 kb on + strand at 2375.491 kb on - strand at 2375.570 kb on - strand, within DvMF_1926 at 2375.594 kb on - strand, within DvMF_1926 at 2375.823 kb on + strand at 2375.895 kb on + strand at 2375.925 kb on + strand at 2376.025 kb on - strand at 2376.360 kb on - strand, within DvMF_1927 at 2376.380 kb on + strand, within DvMF_1927 at 2376.424 kb on - strand, within DvMF_1927 at 2376.456 kb on + strand, within DvMF_1927 at 2376.539 kb on - strand, within DvMF_1927 at 2376.630 kb on + strand, within DvMF_1927 at 2376.902 kb on - strand, within DvMF_1927 at 2377.018 kb on + strand, within DvMF_1927 at 2377.224 kb on + strand, within DvMF_1927 at 2377.338 kb on - strand, within DvMF_1927 at 2377.481 kb on - strand, within DvMF_1927 at 2377.539 kb on - strand, within DvMF_1927 at 2377.936 kb on + strand at 2378.059 kb on + strand at 2378.537 kb on + strand, within DvMF_1928 at 2378.620 kb on - strand, within DvMF_1928
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.25 % remove 2,374,973 - -0.4 2,375,478 + -1.5 2,375,491 - -0.1 2,375,570 - DvMF_1926 0.21 -0.5 2,375,594 - DvMF_1926 0.28 -1.2 2,375,823 + -0.7 2,375,895 + -1.1 2,375,925 + -0.4 2,376,025 - -0.8 2,376,360 - DvMF_1927 0.23 -0.8 2,376,380 + DvMF_1927 0.24 -0.9 2,376,424 - DvMF_1927 0.27 -0.4 2,376,456 + DvMF_1927 0.28 -0.6 2,376,539 - DvMF_1927 0.32 -0.5 2,376,630 + DvMF_1927 0.37 -0.8 2,376,902 - DvMF_1927 0.51 -0.8 2,377,018 + DvMF_1927 0.57 -0.6 2,377,224 + DvMF_1927 0.68 -1.5 2,377,338 - DvMF_1927 0.74 -0.5 2,377,481 - DvMF_1927 0.81 -1.0 2,377,539 - DvMF_1927 0.84 -0.3 2,377,936 + -0.9 2,378,059 + -1.3 2,378,537 + DvMF_1928 0.33 -1.0 2,378,620 - DvMF_1928 0.39 -0.7
Or see this region's nucleotide sequence