Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1527 and DvMF_1528 are separated by 507 nucleotides DvMF_1528 and DvMF_1529 are separated by 72 nucleotides DvMF_1529 and DvMF_1530 are separated by 371 nucleotides
DvMF_1527: DvMF_1527 - hypothetical protein (RefSeq), at 1,881,861 to 1,882,715
_1527
DvMF_1528: DvMF_1528 - phospholipase D/Transphosphatidylase (RefSeq), at 1,883,223 to 1,884,692
_1528
DvMF_1529: DvMF_1529 - UspA domain protein (RefSeq), at 1,884,765 to 1,885,190
_1529
DvMF_1530: DvMF_1530 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq), at 1,885,562 to 1,888,252
_1530
Position (kb)
1883
1884
1885 Strain fitness (log2 ratio)
-1
0
1 at 1882.234 kb on + strand, within DvMF_1527 at 1882.403 kb on - strand, within DvMF_1527 at 1882.462 kb on - strand, within DvMF_1527 at 1883.307 kb on - strand at 1883.422 kb on - strand, within DvMF_1528 at 1883.587 kb on - strand, within DvMF_1528 at 1883.594 kb on + strand, within DvMF_1528 at 1883.662 kb on + strand, within DvMF_1528 at 1883.670 kb on - strand, within DvMF_1528 at 1883.745 kb on + strand, within DvMF_1528 at 1883.833 kb on - strand, within DvMF_1528 at 1883.908 kb on + strand, within DvMF_1528 at 1883.943 kb on + strand, within DvMF_1528 at 1883.944 kb on - strand, within DvMF_1528 at 1883.960 kb on + strand, within DvMF_1528 at 1884.231 kb on + strand, within DvMF_1528 at 1884.255 kb on + strand, within DvMF_1528 at 1884.268 kb on - strand, within DvMF_1528 at 1884.273 kb on - strand, within DvMF_1528 at 1884.280 kb on + strand, within DvMF_1528 at 1884.285 kb on + strand, within DvMF_1528 at 1884.346 kb on - strand, within DvMF_1528 at 1884.536 kb on + strand, within DvMF_1528 at 1884.562 kb on - strand at 1884.634 kb on - strand at 1884.719 kb on - strand at 1884.918 kb on - strand, within DvMF_1529 at 1884.951 kb on - strand, within DvMF_1529 at 1885.028 kb on - strand, within DvMF_1529 at 1885.209 kb on - strand at 1885.211 kb on - strand at 1885.335 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.25 % remove 1,882,234 + DvMF_1527 0.44 -0.4 1,882,403 - DvMF_1527 0.63 -0.5 1,882,462 - DvMF_1527 0.70 -0.8 1,883,307 - -0.5 1,883,422 - DvMF_1528 0.14 -0.5 1,883,587 - DvMF_1528 0.25 -1.2 1,883,594 + DvMF_1528 0.25 -1.0 1,883,662 + DvMF_1528 0.30 -0.3 1,883,670 - DvMF_1528 0.30 -1.1 1,883,745 + DvMF_1528 0.36 -0.4 1,883,833 - DvMF_1528 0.41 -0.8 1,883,908 + DvMF_1528 0.47 -1.5 1,883,943 + DvMF_1528 0.49 +0.2 1,883,944 - DvMF_1528 0.49 -0.7 1,883,960 + DvMF_1528 0.50 +0.0 1,884,231 + DvMF_1528 0.69 -0.3 1,884,255 + DvMF_1528 0.70 -0.7 1,884,268 - DvMF_1528 0.71 -0.1 1,884,273 - DvMF_1528 0.71 -1.3 1,884,280 + DvMF_1528 0.72 -1.2 1,884,285 + DvMF_1528 0.72 -0.7 1,884,346 - DvMF_1528 0.76 -1.1 1,884,536 + DvMF_1528 0.89 +0.9 1,884,562 - -1.1 1,884,634 - +0.2 1,884,719 - -0.3 1,884,918 - DvMF_1529 0.36 -0.6 1,884,951 - DvMF_1529 0.44 -0.8 1,885,028 - DvMF_1529 0.62 -0.8 1,885,209 - -0.4 1,885,211 - -0.5 1,885,335 + -1.1
Or see this region's nucleotide sequence