Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1158
Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Furfuryl Alcohol 0.25 % |
---|---|---|---|---|---|
remove | |||||
1,421,758 | + | DvMF_1157 | 0.60 | +2.2 | |
1,421,879 | + | DvMF_1157 | 0.66 | +1.7 | |
1,421,948 | + | DvMF_1157 | 0.69 | +1.8 | |
1,421,948 | + | DvMF_1157 | 0.69 | +1.9 | |
1,421,967 | - | DvMF_1157 | 0.70 | +2.1 | |
1,422,276 | + | DvMF_1157 | 0.84 | +2.3 | |
1,422,284 | - | DvMF_1157 | 0.85 | +2.3 | |
1,422,353 | + | DvMF_1157 | 0.88 | +1.9 | |
1,422,366 | - | DvMF_1157 | 0.88 | +1.9 | |
1,422,461 | + | +1.4 | |||
1,422,613 | + | +1.4 | |||
1,422,958 | - | DvMF_1158 | 0.16 | -4.7 | |
1,423,188 | + | DvMF_1158 | 0.34 | -3.1 | |
1,423,355 | - | DvMF_1158 | 0.47 | +0.2 | |
1,423,601 | + | DvMF_1158 | 0.66 | -1.2 | |
1,424,093 | + | +1.2 | |||
1,424,233 | + | DvMF_1159 | 0.14 | +3.1 | |
1,424,294 | + | DvMF_1159 | 0.18 | +2.4 | |
1,424,306 | + | DvMF_1159 | 0.19 | +1.1 | |
1,424,488 | + | DvMF_1159 | 0.32 | +1.7 | |
1,424,488 | + | DvMF_1159 | 0.32 | +1.8 | |
1,424,496 | - | DvMF_1159 | 0.33 | +1.9 | |
1,424,701 | + | DvMF_1159 | 0.47 | +1.7 | |
1,424,709 | - | DvMF_1159 | 0.48 | +2.1 | |
1,424,709 | - | DvMF_1159 | 0.48 | +1.8 | |
1,424,709 | - | DvMF_1159 | 0.48 | +1.9 | |
1,424,768 | - | DvMF_1159 | 0.52 | +1.9 |
Or see this region's nucleotide sequence