Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0991 and DvMF_0992 are separated by 96 nucleotides DvMF_0992 and DvMF_0993 are separated by 206 nucleotides DvMF_0993 and DvMF_0994 are separated by 209 nucleotides DvMF_0994 and DvMF_0995 are separated by 144 nucleotides
DvMF_0991: DvMF_0991 - signal transduction histidine kinase, nitrogen specific, NtrB (RefSeq), at 1,204,387 to 1,206,210
_0991
DvMF_0992: DvMF_0992 - hypothetical protein (RefSeq), at 1,206,307 to 1,206,990
_0992
DvMF_0993: DvMF_0993 - transcriptional regulator, Crp/Fnr family (RefSeq), at 1,207,197 to 1,207,886
_0993
DvMF_0994: DvMF_0994 - hypothetical protein (RefSeq), at 1,208,096 to 1,208,602
_0994
DvMF_0995: DvMF_0995 - metal dependent phosphohydrolase (RefSeq), at 1,208,747 to 1,210,003
_0995
Position (kb)
1207
1208 Strain fitness (log2 ratio)
-1
0
1 at 1206.205 kb on + strand at 1206.205 kb on + strand at 1206.293 kb on + strand at 1206.322 kb on - strand at 1206.741 kb on + strand, within DvMF_0992 at 1206.749 kb on - strand, within DvMF_0992 at 1206.804 kb on + strand, within DvMF_0992 at 1206.811 kb on - strand, within DvMF_0992 at 1207.157 kb on + strand at 1207.354 kb on + strand, within DvMF_0993 at 1207.520 kb on + strand, within DvMF_0993 at 1207.545 kb on + strand, within DvMF_0993 at 1207.620 kb on - strand, within DvMF_0993 at 1207.799 kb on - strand, within DvMF_0993 at 1208.259 kb on + strand, within DvMF_0994 at 1208.259 kb on + strand, within DvMF_0994 at 1208.561 kb on + strand at 1208.729 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.25 % remove 1,206,205 + -0.5 1,206,205 + +0.2 1,206,293 + -0.3 1,206,322 - -0.4 1,206,741 + DvMF_0992 0.63 -0.8 1,206,749 - DvMF_0992 0.65 +0.1 1,206,804 + DvMF_0992 0.73 -0.6 1,206,811 - DvMF_0992 0.74 +0.2 1,207,157 + -1.1 1,207,354 + DvMF_0993 0.23 -0.5 1,207,520 + DvMF_0993 0.47 +1.3 1,207,545 + DvMF_0993 0.50 +1.4 1,207,620 - DvMF_0993 0.61 -0.4 1,207,799 - DvMF_0993 0.87 -0.6 1,208,259 + DvMF_0994 0.32 -0.4 1,208,259 + DvMF_0994 0.32 +0.2 1,208,561 + -1.3 1,208,729 - -0.1
Or see this region's nucleotide sequence