Experiment: MoYLS4 with Furfuryl Alcohol 0.25 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0006 and DvMF_R0001 are separated by 405 nucleotides DvMF_R0001 and DvMF_0007 are separated by 316 nucleotides DvMF_0007 and DvMF_R0002 are separated by 71 nucleotides DvMF_R0002 and DvMF_R0003 are separated by 57 nucleotides DvMF_R0003 and DvMF_R0004 are separated by 8 nucleotides DvMF_R0004 and DvMF_R0005 are separated by 13 nucleotides DvMF_R0005 and DvMF_0008 are separated by 475 nucleotides
DvMF_0006: DvMF_0006 - hypothetical protein (RefSeq), at 7,599 to 8,240
_0006
DvMF_R0001: DvMF_R0001 - tRNA-Gly (RefSeq), at 8,646 to 8,720
_R0001
DvMF_0007: DvMF_0007 - protein of unknown function DUF302 (RefSeq), at 9,037 to 9,444
_0007
DvMF_R0002: DvMF_R0002 - tRNA-Gly (RefSeq), at 9,516 to 9,590
_R0002
DvMF_R0003: DvMF_R0003 - tRNA-Gly (RefSeq), at 9,648 to 9,722
_R0003
DvMF_R0004: DvMF_R0004 - tRNA-Cys (RefSeq), at 9,731 to 9,805
_R0004
DvMF_R0005: DvMF_R0005 - tRNA-Gly (RefSeq), at 9,819 to 9,893
_R0005
DvMF_0008: DvMF_0008 - transcriptional regulator, TraR/DksA family (RefSeq), at 10,369 to 10,731
_0008
Position (kb)
9
10 Strain fitness (log2 ratio)
-1
0
1 at 8.083 kb on - strand, within DvMF_0006 at 8.096 kb on + strand, within DvMF_0006 at 8.254 kb on - strand at 8.339 kb on - strand at 8.505 kb on + strand at 8.633 kb on - strand at 8.683 kb on - strand, within DvMF_R0001 at 8.966 kb on - strand at 8.993 kb on - strand at 9.136 kb on - strand, within DvMF_0007 at 9.189 kb on + strand, within DvMF_0007 at 9.241 kb on + strand, within DvMF_0007 at 9.268 kb on + strand, within DvMF_0007 at 9.268 kb on + strand, within DvMF_0007 at 9.362 kb on + strand, within DvMF_0007 at 9.399 kb on - strand, within DvMF_0007 at 9.412 kb on + strand at 9.553 kb on - strand, within DvMF_R0002 at 9.702 kb on + strand, within DvMF_R0003 at 10.109 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.25 % remove 8,083 - DvMF_0006 0.75 -0.1 8,096 + DvMF_0006 0.77 -0.6 8,254 - -0.4 8,339 - -1.2 8,505 + -0.8 8,633 - -0.2 8,683 - DvMF_R0001 0.49 -0.5 8,966 - -0.3 8,993 - -0.9 9,136 - DvMF_0007 0.24 +0.1 9,189 + DvMF_0007 0.37 -0.4 9,241 + DvMF_0007 0.50 -0.6 9,268 + DvMF_0007 0.57 -0.2 9,268 + DvMF_0007 0.57 -0.3 9,362 + DvMF_0007 0.80 -0.6 9,399 - DvMF_0007 0.89 -0.5 9,412 + +0.3 9,553 - DvMF_R0002 0.49 -1.2 9,702 + DvMF_R0003 0.72 -1.2 10,109 + +0.7
Or see this region's nucleotide sequence