Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0025 and DVUA0028 are separated by 345 nucleotides DVUA0028 and DVUA0029 are separated by 120 nucleotides DVUA0029 and DVUA0030 are separated by 522 nucleotides
DVUA0025: DVUA0025 - response regulator receiver domain protein (TIGR), at 30,780 to 31,241
DVUA0025
DVUA0028: DVUA0028 - hypothetical protein (TIGR), at 31,587 to 31,997
DVUA0028
DVUA0029: DVUA0029 - hypothetical protein (TIGR), at 32,118 to 32,798
DVUA0029
DVUA0030: DVUA0030 - hypothetical protein (TIGR), at 33,321 to 34,022
DVUA0030
Position (kb)
32
33 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 31.205 kb on + strand at 31.208 kb on - strand at 31.213 kb on - strand at 31.213 kb on - strand at 31.271 kb on - strand at 31.306 kb on - strand at 31.635 kb on - strand, within DVUA0028 at 31.635 kb on - strand, within DVUA0028 at 31.635 kb on - strand, within DVUA0028 at 31.660 kb on + strand, within DVUA0028 at 32.389 kb on + strand, within DVUA0029 at 32.503 kb on - strand, within DVUA0029 at 32.508 kb on + strand, within DVUA0029 at 32.528 kb on - strand, within DVUA0029 at 32.543 kb on - strand, within DVUA0029 at 32.560 kb on + strand, within DVUA0029 at 32.568 kb on - strand, within DVUA0029 at 32.662 kb on - strand, within DVUA0029 at 32.678 kb on + strand, within DVUA0029 at 32.742 kb on + strand at 32.761 kb on - strand at 32.813 kb on + strand at 32.818 kb on + strand at 32.821 kb on - strand at 32.821 kb on - strand at 32.837 kb on - strand at 32.850 kb on + strand at 32.869 kb on - strand at 32.871 kb on - strand at 32.885 kb on + strand at 32.903 kb on - strand at 32.922 kb on + strand at 32.953 kb on + strand at 33.001 kb on + strand at 33.017 kb on - strand at 33.034 kb on + strand at 33.052 kb on - strand at 33.061 kb on - strand at 33.113 kb on + strand at 33.121 kb on - strand at 33.121 kb on - strand at 33.121 kb on - strand at 33.139 kb on + strand at 33.147 kb on - strand at 33.173 kb on - strand at 33.315 kb on + strand at 33.352 kb on - strand at 33.449 kb on + strand, within DVUA0030 at 33.468 kb on + strand, within DVUA0030 at 33.494 kb on + strand, within DVUA0030 at 33.556 kb on + strand, within DVUA0030 at 33.702 kb on + strand, within DVUA0030 at 33.710 kb on - strand, within DVUA0030 at 33.726 kb on + strand, within DVUA0030 at 33.734 kb on - strand, within DVUA0030 at 33.739 kb on - strand, within DVUA0030 at 33.788 kb on + strand, within DVUA0030 at 33.796 kb on - strand, within DVUA0030 at 33.796 kb on - strand, within DVUA0030 at 33.796 kb on - strand, within DVUA0030
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 31,205 + -0.3 31,208 - +0.2 31,213 - -0.7 31,213 - -0.2 31,271 - +0.6 31,306 - -0.6 31,635 - DVUA0028 0.12 +0.0 31,635 - DVUA0028 0.12 -0.9 31,635 - DVUA0028 0.12 -0.5 31,660 + DVUA0028 0.18 -0.5 32,389 + DVUA0029 0.40 +0.0 32,503 - DVUA0029 0.57 +1.7 32,508 + DVUA0029 0.57 -0.1 32,528 - DVUA0029 0.60 +1.1 32,543 - DVUA0029 0.62 +0.1 32,560 + DVUA0029 0.65 +0.5 32,568 - DVUA0029 0.66 -0.4 32,662 - DVUA0029 0.80 +0.7 32,678 + DVUA0029 0.82 -0.1 32,742 + -0.2 32,761 - -0.1 32,813 + +1.3 32,818 + -0.1 32,821 - -1.3 32,821 - +0.6 32,837 - -1.0 32,850 + -0.5 32,869 - +0.1 32,871 - -0.9 32,885 + +1.4 32,903 - -0.5 32,922 + +0.5 32,953 + -0.2 33,001 + -0.5 33,017 - +0.6 33,034 + -0.7 33,052 - +0.7 33,061 - -0.1 33,113 + +0.6 33,121 - -2.2 33,121 - +0.8 33,121 - -2.2 33,139 + +0.2 33,147 - +0.9 33,173 - -0.6 33,315 + -1.1 33,352 - -0.2 33,449 + DVUA0030 0.18 -0.2 33,468 + DVUA0030 0.21 -0.7 33,494 + DVUA0030 0.25 -1.4 33,556 + DVUA0030 0.33 -0.0 33,702 + DVUA0030 0.54 +0.1 33,710 - DVUA0030 0.55 +0.4 33,726 + DVUA0030 0.58 +0.5 33,734 - DVUA0030 0.59 +0.4 33,739 - DVUA0030 0.60 -0.1 33,788 + DVUA0030 0.67 +1.5 33,796 - DVUA0030 0.68 -0.0 33,796 - DVUA0030 0.68 +2.5 33,796 - DVUA0030 0.68 -0.5
Or see this region's nucleotide sequence