Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2859 and DVU2860 are separated by 3 nucleotides DVU2860 and DVU2861 overlap by 17 nucleotides DVU2861 and DVU2862 overlap by 4 nucleotides DVU2862 and DVU2863 overlap by 4 nucleotides DVU2863 and DVU2864 are separated by 2 nucleotides
DVU2859: DVU2859 - tail sheath protein, putative (TIGR), at 2,958,791 to 2,960,254
DVU2859
DVU2860: DVU2860 - conserved hypothetical protein (TIGR), at 2,960,258 to 2,960,449
DVU2860
DVU2861: DVU2861 - hypothetical protein (TIGR), at 2,960,433 to 2,960,990
DVU2861
DVU2862: DVU2862 - hypothetical protein (TIGR), at 2,960,987 to 2,961,313
DVU2862
DVU2863: DVU2863 - hypothetical protein (TIGR), at 2,961,310 to 2,961,903
DVU2863
DVU2864: DVU2864 - hypothetical protein (TIGR), at 2,961,906 to 2,962,049
DVU2864
Position (kb)
2960
2961 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2959.453 kb on + strand, within DVU2859 at 2959.930 kb on + strand, within DVU2859 at 2959.933 kb on - strand, within DVU2859 at 2959.988 kb on + strand, within DVU2859 at 2960.030 kb on - strand, within DVU2859 at 2960.703 kb on + strand, within DVU2861 at 2960.925 kb on - strand, within DVU2861 at 2960.925 kb on - strand, within DVU2861 at 2961.473 kb on - strand, within DVU2863 at 2961.473 kb on - strand, within DVU2863 at 2961.978 kb on + strand, within DVU2864 at 2961.978 kb on + strand, within DVU2864
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 2,959,453 + DVU2859 0.45 -0.6 2,959,930 + DVU2859 0.78 -2.6 2,959,933 - DVU2859 0.78 -1.7 2,959,988 + DVU2859 0.82 -0.3 2,960,030 - DVU2859 0.85 -0.6 2,960,703 + DVU2861 0.48 -0.2 2,960,925 - DVU2861 0.88 -2.6 2,960,925 - DVU2861 0.88 -3.0 2,961,473 - DVU2863 0.27 -1.1 2,961,473 - DVU2863 0.27 +0.4 2,961,978 + DVU2864 0.50 -0.6 2,961,978 + DVU2864 0.50 -0.7
Or see this region's nucleotide sequence