Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2575 and DVU2576 overlap by 4 nucleotides DVU2576 and DVU2577 are separated by 94 nucleotides DVU2577 and tRNA-Leu are separated by 131 nucleotides
DVU2575: DVU2575 - peptidase, M20/M25/M40 family (TIGR), at 2,688,199 to 2,689,299
DVU2575
DVU2576: DVU2576 - oligopeptide ABC transporter, ATP-binding protein (TIGR), at 2,689,296 to 2,690,261
DVU2576
DVU2577: DVU2577 - DNA-binding response regulator, LuxR family (TIGR), at 2,690,356 to 2,691,006
DVU2577
DVU_tRNA-Leu-6: tRNA-Leu - tRNA with anticodon CAG for Leu (VIMSS-AUTO), at 2,691,138 to 2,691,224
tRNA-Leu
Position (kb)
2689
2690
2691 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2688.305 kb on - strand at 2688.374 kb on - strand, within DVU2575 at 2688.394 kb on + strand, within DVU2575 at 2688.402 kb on + strand, within DVU2575 at 2688.402 kb on - strand, within DVU2575 at 2688.444 kb on + strand, within DVU2575 at 2688.452 kb on - strand, within DVU2575 at 2688.452 kb on - strand, within DVU2575 at 2688.506 kb on - strand, within DVU2575 at 2688.526 kb on - strand, within DVU2575 at 2688.569 kb on - strand, within DVU2575 at 2688.745 kb on + strand, within DVU2575 at 2688.745 kb on + strand, within DVU2575 at 2688.767 kb on + strand, within DVU2575 at 2688.839 kb on + strand, within DVU2575 at 2688.852 kb on - strand, within DVU2575 at 2688.873 kb on - strand, within DVU2575 at 2688.892 kb on - strand, within DVU2575 at 2688.928 kb on + strand, within DVU2575 at 2688.965 kb on + strand, within DVU2575 at 2688.968 kb on - strand, within DVU2575 at 2689.049 kb on - strand, within DVU2575 at 2689.087 kb on + strand, within DVU2575 at 2689.087 kb on + strand, within DVU2575 at 2689.089 kb on + strand, within DVU2575 at 2689.095 kb on - strand, within DVU2575 at 2689.117 kb on + strand, within DVU2575 at 2689.185 kb on - strand, within DVU2575 at 2689.191 kb on + strand at 2689.199 kb on - strand at 2689.219 kb on - strand at 2689.228 kb on + strand at 2689.251 kb on + strand at 2689.298 kb on + strand at 2689.299 kb on + strand at 2689.317 kb on + strand at 2689.335 kb on + strand at 2689.381 kb on + strand at 2689.406 kb on + strand, within DVU2576 at 2689.406 kb on + strand, within DVU2576 at 2689.407 kb on - strand, within DVU2576 at 2689.439 kb on + strand, within DVU2576 at 2689.439 kb on + strand, within DVU2576 at 2689.441 kb on + strand, within DVU2576 at 2689.447 kb on - strand, within DVU2576 at 2689.449 kb on + strand, within DVU2576 at 2689.460 kb on + strand, within DVU2576 at 2689.516 kb on + strand, within DVU2576 at 2689.524 kb on - strand, within DVU2576 at 2689.568 kb on + strand, within DVU2576 at 2689.571 kb on + strand, within DVU2576 at 2689.593 kb on + strand, within DVU2576 at 2689.593 kb on + strand, within DVU2576 at 2689.693 kb on + strand, within DVU2576 at 2689.701 kb on - strand, within DVU2576 at 2689.701 kb on - strand, within DVU2576 at 2689.701 kb on - strand, within DVU2576 at 2689.723 kb on + strand, within DVU2576 at 2689.802 kb on - strand, within DVU2576 at 2689.810 kb on - strand, within DVU2576 at 2689.821 kb on - strand, within DVU2576 at 2689.831 kb on + strand, within DVU2576 at 2689.841 kb on + strand, within DVU2576 at 2689.848 kb on + strand, within DVU2576 at 2689.923 kb on - strand, within DVU2576 at 2690.006 kb on + strand, within DVU2576 at 2690.006 kb on - strand, within DVU2576 at 2690.042 kb on + strand, within DVU2576 at 2690.050 kb on - strand, within DVU2576 at 2690.065 kb on + strand, within DVU2576 at 2690.145 kb on + strand, within DVU2576 at 2690.310 kb on - strand at 2690.343 kb on - strand at 2690.358 kb on + strand at 2690.414 kb on - strand at 2690.418 kb on + strand at 2690.455 kb on + strand, within DVU2577 at 2690.520 kb on + strand, within DVU2577 at 2690.535 kb on - strand, within DVU2577 at 2690.648 kb on + strand, within DVU2577 at 2690.650 kb on - strand, within DVU2577 at 2690.699 kb on - strand, within DVU2577 at 2690.921 kb on - strand, within DVU2577 at 2691.032 kb on + strand at 2691.244 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 2,688,305 - -1.3 2,688,374 - DVU2575 0.16 -0.5 2,688,394 + DVU2575 0.18 +0.0 2,688,402 + DVU2575 0.18 +0.2 2,688,402 - DVU2575 0.18 +0.3 2,688,444 + DVU2575 0.22 +0.6 2,688,452 - DVU2575 0.23 +0.1 2,688,452 - DVU2575 0.23 +0.6 2,688,506 - DVU2575 0.28 -0.1 2,688,526 - DVU2575 0.30 -0.6 2,688,569 - DVU2575 0.34 +0.1 2,688,745 + DVU2575 0.50 -0.1 2,688,745 + DVU2575 0.50 -0.2 2,688,767 + DVU2575 0.52 +0.9 2,688,839 + DVU2575 0.58 +1.4 2,688,852 - DVU2575 0.59 -1.2 2,688,873 - DVU2575 0.61 +0.3 2,688,892 - DVU2575 0.63 -0.5 2,688,928 + DVU2575 0.66 +0.1 2,688,965 + DVU2575 0.70 -1.7 2,688,968 - DVU2575 0.70 -0.2 2,689,049 - DVU2575 0.77 -2.0 2,689,087 + DVU2575 0.81 -0.1 2,689,087 + DVU2575 0.81 -0.3 2,689,089 + DVU2575 0.81 +1.6 2,689,095 - DVU2575 0.81 -0.5 2,689,117 + DVU2575 0.83 +1.0 2,689,185 - DVU2575 0.90 +0.8 2,689,191 + -0.6 2,689,199 - +0.6 2,689,219 - -1.1 2,689,228 + -0.0 2,689,251 + +1.4 2,689,298 + -0.3 2,689,299 + -1.1 2,689,317 + +0.2 2,689,335 + -1.4 2,689,381 + +0.4 2,689,406 + DVU2576 0.11 -0.4 2,689,406 + DVU2576 0.11 -0.4 2,689,407 - DVU2576 0.11 +0.0 2,689,439 + DVU2576 0.15 +0.4 2,689,439 + DVU2576 0.15 +0.1 2,689,441 + DVU2576 0.15 -0.1 2,689,447 - DVU2576 0.16 +0.9 2,689,449 + DVU2576 0.16 -0.2 2,689,460 + DVU2576 0.17 +0.3 2,689,516 + DVU2576 0.23 -0.3 2,689,524 - DVU2576 0.24 -0.3 2,689,568 + DVU2576 0.28 +0.7 2,689,571 + DVU2576 0.28 +0.7 2,689,593 + DVU2576 0.31 -0.4 2,689,593 + DVU2576 0.31 +0.2 2,689,693 + DVU2576 0.41 +0.4 2,689,701 - DVU2576 0.42 -1.5 2,689,701 - DVU2576 0.42 -0.2 2,689,701 - DVU2576 0.42 -1.1 2,689,723 + DVU2576 0.44 -0.2 2,689,802 - DVU2576 0.52 +0.4 2,689,810 - DVU2576 0.53 +0.5 2,689,821 - DVU2576 0.54 -0.4 2,689,831 + DVU2576 0.55 +1.0 2,689,841 + DVU2576 0.56 +0.7 2,689,848 + DVU2576 0.57 +1.2 2,689,923 - DVU2576 0.65 +0.3 2,690,006 + DVU2576 0.73 -0.1 2,690,006 - DVU2576 0.73 -1.5 2,690,042 + DVU2576 0.77 +2.0 2,690,050 - DVU2576 0.78 +0.1 2,690,065 + DVU2576 0.80 -2.3 2,690,145 + DVU2576 0.88 +0.4 2,690,310 - +1.1 2,690,343 - +0.2 2,690,358 + -0.6 2,690,414 - -0.4 2,690,418 + +1.0 2,690,455 + DVU2577 0.15 +2.5 2,690,520 + DVU2577 0.25 +0.8 2,690,535 - DVU2577 0.27 +0.2 2,690,648 + DVU2577 0.45 +1.2 2,690,650 - DVU2577 0.45 -1.1 2,690,699 - DVU2577 0.53 -0.7 2,690,921 - DVU2577 0.87 +0.3 2,691,032 + +0.2 2,691,244 - +0.4
Or see this region's nucleotide sequence