Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2485 and DVU2486 are separated by 394 nucleotides DVU2486 and DVU2487 are separated by 48 nucleotides DVU2487 and DVU2489 are separated by 745 nucleotides
DVU2485: DVU2485 - membrane protein, putative (TIGR), at 2,596,160 to 2,597,224
DVU2485
DVU2486: DVU2486 - acetyltransferase, GNAT family (TIGR), at 2,597,619 to 2,598,164
DVU2486
DVU2487: DVU2487 - hypothetical protein (TIGR), at 2,598,213 to 2,599,400
DVU2487
DVU2489: DVU2489 - hypothetical protein (TIGR), at 2,600,146 to 2,600,436
DVU2489
Position (kb)
2598
2599
2600 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2597.343 kb on + strand at 2597.361 kb on - strand at 2597.389 kb on + strand at 2597.437 kb on + strand at 2597.437 kb on + strand at 2597.490 kb on + strand at 2597.546 kb on - strand at 2597.593 kb on - strand at 2597.616 kb on + strand at 2597.634 kb on + strand at 2597.677 kb on + strand, within DVU2486 at 2597.758 kb on - strand, within DVU2486 at 2597.777 kb on + strand, within DVU2486 at 2597.779 kb on + strand, within DVU2486 at 2597.787 kb on - strand, within DVU2486 at 2597.787 kb on - strand, within DVU2486 at 2597.787 kb on - strand, within DVU2486 at 2597.792 kb on - strand, within DVU2486 at 2597.890 kb on - strand, within DVU2486 at 2597.968 kb on + strand, within DVU2486 at 2597.984 kb on - strand, within DVU2486 at 2598.005 kb on - strand, within DVU2486 at 2598.052 kb on + strand, within DVU2486 at 2598.060 kb on - strand, within DVU2486 at 2598.079 kb on + strand, within DVU2486 at 2598.087 kb on - strand, within DVU2486 at 2598.173 kb on + strand at 2598.173 kb on + strand at 2598.193 kb on - strand at 2598.241 kb on - strand at 2598.241 kb on - strand at 2598.255 kb on + strand at 2598.263 kb on - strand at 2598.263 kb on - strand at 2598.263 kb on - strand at 2598.466 kb on + strand, within DVU2487 at 2598.506 kb on + strand, within DVU2487 at 2598.536 kb on + strand, within DVU2487 at 2598.723 kb on + strand, within DVU2487 at 2598.732 kb on - strand, within DVU2487 at 2598.770 kb on + strand, within DVU2487 at 2598.870 kb on + strand, within DVU2487 at 2598.896 kb on + strand, within DVU2487 at 2598.942 kb on + strand, within DVU2487 at 2599.031 kb on - strand, within DVU2487 at 2599.031 kb on - strand, within DVU2487 at 2599.162 kb on + strand, within DVU2487 at 2599.172 kb on + strand, within DVU2487 at 2599.175 kb on - strand, within DVU2487 at 2599.244 kb on + strand, within DVU2487 at 2599.387 kb on - strand at 2599.507 kb on + strand at 2599.537 kb on - strand at 2599.568 kb on + strand at 2599.591 kb on + strand at 2599.610 kb on - strand at 2599.645 kb on + strand at 2599.751 kb on - strand at 2599.865 kb on - strand at 2599.951 kb on + strand at 2600.005 kb on - strand at 2600.037 kb on + strand at 2600.106 kb on + strand at 2600.142 kb on + strand at 2600.174 kb on - strand at 2600.188 kb on - strand, within DVU2489 at 2600.223 kb on + strand, within DVU2489 at 2600.223 kb on + strand, within DVU2489 at 2600.242 kb on + strand, within DVU2489 at 2600.275 kb on - strand, within DVU2489 at 2600.277 kb on - strand, within DVU2489 at 2600.337 kb on + strand, within DVU2489 at 2600.337 kb on + strand, within DVU2489 at 2600.353 kb on - strand, within DVU2489
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 2,597,343 + -0.7 2,597,361 - +0.5 2,597,389 + -0.1 2,597,437 + +1.5 2,597,437 + +0.6 2,597,490 + -0.8 2,597,546 - +1.4 2,597,593 - -0.4 2,597,616 + -0.4 2,597,634 + +1.4 2,597,677 + DVU2486 0.11 -0.5 2,597,758 - DVU2486 0.25 +0.1 2,597,777 + DVU2486 0.29 +0.6 2,597,779 + DVU2486 0.29 -1.8 2,597,787 - DVU2486 0.31 +0.6 2,597,787 - DVU2486 0.31 +0.6 2,597,787 - DVU2486 0.31 +0.8 2,597,792 - DVU2486 0.32 -0.0 2,597,890 - DVU2486 0.50 -0.1 2,597,968 + DVU2486 0.64 +0.6 2,597,984 - DVU2486 0.67 +2.6 2,598,005 - DVU2486 0.71 +0.4 2,598,052 + DVU2486 0.79 +0.4 2,598,060 - DVU2486 0.81 -0.9 2,598,079 + DVU2486 0.84 -0.1 2,598,087 - DVU2486 0.86 +1.0 2,598,173 + +0.2 2,598,173 + -1.3 2,598,193 - -0.8 2,598,241 - -0.5 2,598,241 - -0.3 2,598,255 + +0.3 2,598,263 - -0.1 2,598,263 - +0.8 2,598,263 - -0.2 2,598,466 + DVU2487 0.21 +0.1 2,598,506 + DVU2487 0.25 +0.1 2,598,536 + DVU2487 0.27 -0.0 2,598,723 + DVU2487 0.43 +0.4 2,598,732 - DVU2487 0.44 +1.0 2,598,770 + DVU2487 0.47 +0.3 2,598,870 + DVU2487 0.55 +1.6 2,598,896 + DVU2487 0.57 -1.3 2,598,942 + DVU2487 0.61 -1.6 2,599,031 - DVU2487 0.69 +0.6 2,599,031 - DVU2487 0.69 +0.2 2,599,162 + DVU2487 0.80 -0.7 2,599,172 + DVU2487 0.81 +0.5 2,599,175 - DVU2487 0.81 +0.7 2,599,244 + DVU2487 0.87 -0.2 2,599,387 - -0.5 2,599,507 + -0.1 2,599,537 - +0.4 2,599,568 + -0.3 2,599,591 + +0.3 2,599,610 - -0.7 2,599,645 + +0.2 2,599,751 - +0.3 2,599,865 - -1.0 2,599,951 + +0.2 2,600,005 - -0.9 2,600,037 + -0.6 2,600,106 + +0.2 2,600,142 + -0.3 2,600,174 - -0.6 2,600,188 - DVU2489 0.14 -0.4 2,600,223 + DVU2489 0.26 +0.4 2,600,223 + DVU2489 0.26 -0.0 2,600,242 + DVU2489 0.33 +0.6 2,600,275 - DVU2489 0.44 -0.4 2,600,277 - DVU2489 0.45 -0.8 2,600,337 + DVU2489 0.66 -0.8 2,600,337 + DVU2489 0.66 -0.1 2,600,353 - DVU2489 0.71 -0.6
Or see this region's nucleotide sequence