Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2317 and rbr2 are separated by 611 nucleotides rbr2 and DVU2319 are separated by 176 nucleotides DVU2319 and DVU2320 are separated by 25 nucleotides
DVU2317: DVU2317 - methyl-accepting chemotaxis protein, putative (TIGR), at 2,411,334 to 2,413,103
DVU2317
DVU2318: rbr2 - rubrerythrin, putative (TIGR), at 2,413,715 to 2,414,209
rbr2
DVU2319: DVU2319 - transcriptional regulator domain protein (TIGR), at 2,414,386 to 2,414,991
DVU2319
DVU2320: DVU2320 - 3-octaprenyl-4-hydroxybenzoate carboxy-lyase family protein (TIGR), at 2,415,017 to 2,416,855
DVU2320
Position (kb)
2413
2414
2415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2412.916 kb on - strand, within DVU2317 at 2412.916 kb on - strand, within DVU2317 at 2412.939 kb on - strand at 2412.978 kb on - strand at 2413.020 kb on - strand at 2413.031 kb on + strand at 2413.088 kb on - strand at 2413.176 kb on - strand at 2413.192 kb on + strand at 2413.203 kb on + strand at 2413.203 kb on + strand at 2413.211 kb on - strand at 2413.211 kb on - strand at 2413.211 kb on - strand at 2413.244 kb on - strand at 2413.325 kb on + strand at 2413.350 kb on - strand at 2413.415 kb on + strand at 2413.538 kb on + strand at 2413.553 kb on + strand at 2413.597 kb on - strand at 2413.611 kb on - strand at 2413.759 kb on + strand at 2413.767 kb on - strand, within rbr2 at 2413.767 kb on - strand, within rbr2 at 2413.837 kb on - strand, within rbr2 at 2414.037 kb on - strand, within rbr2 at 2414.037 kb on - strand, within rbr2 at 2414.037 kb on - strand, within rbr2 at 2414.104 kb on + strand, within rbr2 at 2414.129 kb on + strand, within rbr2 at 2414.183 kb on - strand at 2414.236 kb on - strand at 2414.362 kb on - strand at 2414.362 kb on - strand at 2414.381 kb on + strand at 2414.440 kb on + strand at 2414.455 kb on - strand, within DVU2319 at 2414.514 kb on + strand, within DVU2319 at 2414.514 kb on + strand, within DVU2319 at 2414.622 kb on + strand, within DVU2319 at 2414.713 kb on + strand, within DVU2319 at 2414.908 kb on + strand, within DVU2319
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 2,412,916 - DVU2317 0.89 -2.0 2,412,916 - DVU2317 0.89 -0.4 2,412,939 - -0.3 2,412,978 - -0.5 2,413,020 - -0.3 2,413,031 + -1.0 2,413,088 - +1.9 2,413,176 - +0.2 2,413,192 + -0.0 2,413,203 + +0.5 2,413,203 + -1.1 2,413,211 - -1.1 2,413,211 - -1.0 2,413,211 - +0.6 2,413,244 - +0.0 2,413,325 + -0.7 2,413,350 - -3.0 2,413,415 + -1.1 2,413,538 + -0.8 2,413,553 + +0.7 2,413,597 - -2.1 2,413,611 - -1.2 2,413,759 + -0.2 2,413,767 - rbr2 DVU2318 0.11 +2.1 2,413,767 - rbr2 DVU2318 0.11 +0.1 2,413,837 - rbr2 DVU2318 0.25 -0.1 2,414,037 - rbr2 DVU2318 0.65 -0.8 2,414,037 - rbr2 DVU2318 0.65 -0.4 2,414,037 - rbr2 DVU2318 0.65 -0.0 2,414,104 + rbr2 DVU2318 0.79 -1.3 2,414,129 + rbr2 DVU2318 0.84 +0.0 2,414,183 - +0.6 2,414,236 - -0.7 2,414,362 - -0.1 2,414,362 - +0.0 2,414,381 + +1.5 2,414,440 + -0.5 2,414,455 - DVU2319 0.11 -0.4 2,414,514 + DVU2319 0.21 -1.1 2,414,514 + DVU2319 0.21 +0.1 2,414,622 + DVU2319 0.39 +0.6 2,414,713 + DVU2319 0.54 -0.2 2,414,908 + DVU2319 0.86 +0.2
Or see this region's nucleotide sequence