Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1264 and DVU1265 are separated by 10 nucleotides DVU1265 and DVU1266 are separated by 450 nucleotides
DVU1264: DVU1264 - transglycosylase SLT domain protein (TIGR), at 1,352,419 to 1,353,180
DVU1264
DVU1265: DVU1265 - hypothetical protein (TIGR), at 1,353,191 to 1,353,940
DVU1265
DVU1266: DVU1266 - hypothetical protein (TIGR), at 1,354,391 to 1,357,828
DVU1266
Position (kb)
1353
1354 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1352.253 kb on - strand at 1352.282 kb on - strand at 1352.339 kb on + strand at 1352.342 kb on - strand at 1352.347 kb on - strand at 1352.402 kb on - strand at 1352.404 kb on - strand at 1352.406 kb on - strand at 1352.415 kb on + strand at 1352.496 kb on - strand, within DVU1264 at 1352.577 kb on + strand, within DVU1264 at 1352.605 kb on - strand, within DVU1264 at 1352.617 kb on + strand, within DVU1264 at 1352.642 kb on - strand, within DVU1264 at 1352.702 kb on - strand, within DVU1264 at 1352.745 kb on + strand, within DVU1264 at 1352.796 kb on - strand, within DVU1264 at 1353.004 kb on - strand, within DVU1264 at 1353.065 kb on + strand, within DVU1264 at 1353.075 kb on + strand, within DVU1264 at 1353.078 kb on - strand, within DVU1264 at 1353.083 kb on - strand, within DVU1264 at 1353.083 kb on - strand, within DVU1264 at 1353.109 kb on + strand at 1353.116 kb on - strand at 1353.121 kb on + strand at 1353.121 kb on + strand at 1353.121 kb on + strand at 1353.121 kb on + strand at 1353.121 kb on + strand at 1353.129 kb on - strand at 1353.129 kb on - strand at 1353.129 kb on - strand at 1353.129 kb on - strand at 1353.129 kb on - strand at 1353.139 kb on - strand at 1353.143 kb on + strand at 1353.185 kb on - strand at 1353.231 kb on + strand at 1353.231 kb on + strand at 1353.258 kb on - strand at 1353.284 kb on + strand, within DVU1265 at 1353.292 kb on - strand, within DVU1265 at 1353.341 kb on + strand, within DVU1265 at 1353.529 kb on - strand, within DVU1265 at 1353.662 kb on + strand, within DVU1265 at 1353.678 kb on - strand, within DVU1265 at 1353.678 kb on - strand, within DVU1265 at 1353.768 kb on + strand, within DVU1265 at 1353.851 kb on - strand, within DVU1265 at 1353.974 kb on + strand at 1353.974 kb on + strand at 1353.975 kb on - strand at 1354.061 kb on + strand at 1354.136 kb on - strand at 1354.136 kb on - strand at 1354.161 kb on + strand at 1354.239 kb on - strand at 1354.248 kb on + strand at 1354.389 kb on + strand at 1354.396 kb on + strand at 1354.444 kb on + strand at 1354.514 kb on + strand at 1354.515 kb on + strand at 1354.522 kb on - strand at 1354.522 kb on - strand at 1354.526 kb on + strand at 1354.630 kb on + strand at 1354.661 kb on - strand at 1354.667 kb on - strand at 1354.679 kb on - strand at 1354.782 kb on + strand, within DVU1266 at 1354.813 kb on - strand, within DVU1266 at 1354.831 kb on + strand, within DVU1266
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 1,352,253 - -0.3 1,352,282 - +0.2 1,352,339 + +0.1 1,352,342 - -0.1 1,352,347 - -0.8 1,352,402 - -0.6 1,352,404 - -0.5 1,352,406 - -1.9 1,352,415 + -0.1 1,352,496 - DVU1264 0.10 -0.0 1,352,577 + DVU1264 0.21 -0.6 1,352,605 - DVU1264 0.24 +1.5 1,352,617 + DVU1264 0.26 -1.1 1,352,642 - DVU1264 0.29 -0.5 1,352,702 - DVU1264 0.37 -1.5 1,352,745 + DVU1264 0.43 -1.3 1,352,796 - DVU1264 0.49 -1.0 1,353,004 - DVU1264 0.77 -0.9 1,353,065 + DVU1264 0.85 +1.7 1,353,075 + DVU1264 0.86 -1.6 1,353,078 - DVU1264 0.86 -0.0 1,353,083 - DVU1264 0.87 -0.1 1,353,083 - DVU1264 0.87 -0.3 1,353,109 + +0.8 1,353,116 - +0.0 1,353,121 + +0.1 1,353,121 + -0.5 1,353,121 + +0.1 1,353,121 + -0.1 1,353,121 + -1.4 1,353,129 - -0.4 1,353,129 - -2.1 1,353,129 - +0.1 1,353,129 - -0.1 1,353,129 - -0.0 1,353,139 - +0.0 1,353,143 + +0.1 1,353,185 - +0.7 1,353,231 + +1.2 1,353,231 + +0.9 1,353,258 - -0.4 1,353,284 + DVU1265 0.12 +0.6 1,353,292 - DVU1265 0.13 -0.2 1,353,341 + DVU1265 0.20 +0.4 1,353,529 - DVU1265 0.45 +0.5 1,353,662 + DVU1265 0.63 +0.3 1,353,678 - DVU1265 0.65 +1.0 1,353,678 - DVU1265 0.65 -0.1 1,353,768 + DVU1265 0.77 +0.3 1,353,851 - DVU1265 0.88 -1.2 1,353,974 + +0.3 1,353,974 + +0.1 1,353,975 - -1.0 1,354,061 + +0.2 1,354,136 - +0.2 1,354,136 - -0.4 1,354,161 + +0.3 1,354,239 - -0.3 1,354,248 + -0.1 1,354,389 + +0.8 1,354,396 + +0.0 1,354,444 + +0.4 1,354,514 + +1.5 1,354,515 + -0.3 1,354,522 - +0.1 1,354,522 - -0.4 1,354,526 + -0.2 1,354,630 + +0.2 1,354,661 - -1.0 1,354,667 - +0.5 1,354,679 - +2.4 1,354,782 + DVU1266 0.11 -1.3 1,354,813 - DVU1266 0.12 +1.7 1,354,831 + DVU1266 0.13 +1.4
Or see this region's nucleotide sequence