Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt truA and DVU0912 are separated by 1 nucleotides DVU0912 and DVU0913 are separated by 76 nucleotides DVU0913 and cobS are separated by 70 nucleotides
DVU0911: truA - tRNA pseudouridine synthase A (TIGR), at 1,005,807 to 1,006,700
truA
DVU0912: DVU0912 - conserved domain protein (TIGR), at 1,006,702 to 1,007,286
DVU0912
DVU0913: DVU0913 - conserved hypothetical protein (TIGR), at 1,007,363 to 1,007,800
DVU0913
DVU0914: cobS - cobalamin-5-phosphate synthase (TIGR), at 1,007,871 to 1,008,608
cobS
Position (kb)
1007
1008 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1006.482 kb on - strand, within truA at 1006.617 kb on - strand at 1006.643 kb on - strand at 1006.651 kb on - strand at 1006.689 kb on + strand at 1006.693 kb on - strand at 1006.841 kb on + strand, within DVU0912 at 1006.841 kb on - strand, within DVU0912 at 1006.921 kb on + strand, within DVU0912 at 1006.931 kb on + strand, within DVU0912 at 1007.188 kb on + strand, within DVU0912 at 1007.222 kb on + strand, within DVU0912 at 1007.222 kb on + strand, within DVU0912 at 1007.285 kb on + strand at 1007.295 kb on + strand at 1007.303 kb on - strand at 1007.547 kb on + strand, within DVU0913 at 1007.555 kb on - strand, within DVU0913 at 1007.576 kb on + strand, within DVU0913 at 1007.584 kb on - strand, within DVU0913 at 1007.584 kb on - strand, within DVU0913 at 1007.690 kb on - strand, within DVU0913 at 1007.709 kb on + strand, within DVU0913 at 1007.717 kb on - strand, within DVU0913 at 1007.717 kb on - strand, within DVU0913 at 1007.724 kb on + strand, within DVU0913 at 1007.778 kb on + strand at 1007.798 kb on - strand at 1007.823 kb on - strand at 1007.843 kb on + strand at 1007.902 kb on - strand at 1007.926 kb on + strand at 1007.989 kb on + strand, within cobS at 1008.097 kb on + strand, within cobS at 1008.146 kb on - strand, within cobS at 1008.158 kb on + strand, within cobS at 1008.204 kb on - strand, within cobS at 1008.237 kb on + strand, within cobS at 1008.281 kb on - strand, within cobS at 1008.406 kb on + strand, within cobS at 1008.414 kb on - strand, within cobS at 1008.525 kb on - strand, within cobS at 1008.612 kb on - strand at 1008.693 kb on + strand at 1008.698 kb on + strand at 1008.707 kb on + strand at 1008.715 kb on - strand at 1008.724 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 1,006,482 - truA DVU0911 0.76 +0.4 1,006,617 - +0.2 1,006,643 - -0.0 1,006,651 - -1.0 1,006,689 + -0.8 1,006,693 - -0.3 1,006,841 + DVU0912 0.24 -0.6 1,006,841 - DVU0912 0.24 +0.7 1,006,921 + DVU0912 0.37 -0.5 1,006,931 + DVU0912 0.39 -0.1 1,007,188 + DVU0912 0.83 +0.3 1,007,222 + DVU0912 0.89 -0.9 1,007,222 + DVU0912 0.89 +1.1 1,007,285 + -1.0 1,007,295 + -0.3 1,007,303 - +1.2 1,007,547 + DVU0913 0.42 +1.0 1,007,555 - DVU0913 0.44 +0.3 1,007,576 + DVU0913 0.49 +0.6 1,007,584 - DVU0913 0.50 -0.4 1,007,584 - DVU0913 0.50 -0.0 1,007,690 - DVU0913 0.75 +0.6 1,007,709 + DVU0913 0.79 -1.8 1,007,717 - DVU0913 0.81 +0.9 1,007,717 - DVU0913 0.81 +0.6 1,007,724 + DVU0913 0.82 +0.6 1,007,778 + -1.3 1,007,798 - +1.8 1,007,823 - +0.1 1,007,843 + +0.2 1,007,902 - -0.5 1,007,926 + +0.2 1,007,989 + cobS DVU0914 0.16 +0.5 1,008,097 + cobS DVU0914 0.31 -0.8 1,008,146 - cobS DVU0914 0.37 -0.3 1,008,158 + cobS DVU0914 0.39 +1.1 1,008,204 - cobS DVU0914 0.45 +1.0 1,008,237 + cobS DVU0914 0.50 +1.2 1,008,281 - cobS DVU0914 0.56 -0.3 1,008,406 + cobS DVU0914 0.72 +0.1 1,008,414 - cobS DVU0914 0.74 +1.1 1,008,525 - cobS DVU0914 0.89 -0.3 1,008,612 - -1.2 1,008,693 + -0.8 1,008,698 + -0.5 1,008,707 + +0.5 1,008,715 - +0.4 1,008,724 + -0.1
Or see this region's nucleotide sequence