Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0862 and DVU0863 are separated by 10 nucleotides DVU0863 and DVU0864 are separated by 137 nucleotides DVU0864 and DVU0865 overlap by 4 nucleotides
DVU0862: DVU0862 - flagellar protein FliS/hypothetical protein, fusion (TIGR), at 953,768 to 954,673
DVU0862
DVU0863: DVU0863 - flagellar hook-associated protein 2, putative (TIGR), at 954,684 to 956,411
DVU0863
DVU0864: DVU0864 - glycoprotease family protein, putative (TIGR), at 956,549 to 957,334
DVU0864
DVU0865: DVU0865 - membrane-associated zinc metalloprotease, putative (TIGR), at 957,331 to 958,395
DVU0865
Position (kb) 954
955
956
957 Strain fitness (log2 ratio) -2
-1
0
1
2 at 953.685 kb on - strand at 953.702 kb on - strand at 953.726 kb on + strand at 953.739 kb on + strand at 953.753 kb on - strand at 953.753 kb on - strand at 953.753 kb on - strand at 953.760 kb on + strand at 953.763 kb on - strand at 953.782 kb on + strand at 953.896 kb on + strand, within DVU0862 at 953.913 kb on - strand, within DVU0862 at 953.945 kb on - strand, within DVU0862 at 954.068 kb on + strand, within DVU0862 at 954.109 kb on + strand, within DVU0862 at 954.353 kb on - strand, within DVU0862 at 954.376 kb on + strand, within DVU0862 at 954.402 kb on - strand, within DVU0862 at 954.407 kb on - strand, within DVU0862 at 954.407 kb on - strand, within DVU0862 at 954.558 kb on - strand, within DVU0862 at 954.613 kb on - strand at 954.630 kb on + strand at 954.642 kb on + strand at 954.650 kb on - strand at 954.650 kb on - strand at 954.683 kb on - strand at 954.683 kb on - strand at 954.701 kb on + strand at 954.709 kb on - strand at 954.709 kb on - strand at 954.734 kb on + strand at 954.749 kb on + strand at 954.896 kb on + strand, within DVU0863 at 954.928 kb on + strand, within DVU0863 at 954.933 kb on + strand, within DVU0863 at 954.933 kb on + strand, within DVU0863 at 954.936 kb on - strand, within DVU0863 at 954.936 kb on - strand, within DVU0863 at 954.936 kb on - strand, within DVU0863 at 954.938 kb on + strand, within DVU0863 at 954.984 kb on - strand, within DVU0863 at 955.000 kb on + strand, within DVU0863 at 955.075 kb on + strand, within DVU0863 at 955.141 kb on + strand, within DVU0863 at 955.147 kb on + strand, within DVU0863 at 955.155 kb on - strand, within DVU0863 at 955.198 kb on + strand, within DVU0863 at 955.233 kb on + strand, within DVU0863 at 955.249 kb on + strand, within DVU0863 at 955.266 kb on + strand, within DVU0863 at 955.293 kb on - strand, within DVU0863 at 955.293 kb on - strand, within DVU0863 at 955.428 kb on + strand, within DVU0863 at 955.449 kb on + strand, within DVU0863 at 955.533 kb on - strand, within DVU0863 at 955.626 kb on - strand, within DVU0863 at 955.697 kb on + strand, within DVU0863 at 955.705 kb on - strand, within DVU0863 at 955.837 kb on - strand, within DVU0863 at 955.957 kb on + strand, within DVU0863 at 955.975 kb on - strand, within DVU0863 at 955.977 kb on - strand, within DVU0863 at 956.044 kb on - strand, within DVU0863 at 956.136 kb on - strand, within DVU0863 at 956.200 kb on - strand, within DVU0863 at 956.302 kb on - strand at 956.346 kb on - strand at 956.439 kb on - strand at 956.440 kb on - strand at 956.531 kb on + strand at 956.533 kb on + strand at 956.533 kb on + strand at 956.541 kb on - strand at 956.541 kb on - strand at 956.560 kb on - strand at 956.660 kb on + strand, within DVU0864 at 956.683 kb on + strand, within DVU0864 at 956.685 kb on + strand, within DVU0864 at 957.385 kb on - strand at 957.394 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 953,685 - -0.5 953,702 - -0.0 953,726 + -0.9 953,739 + +0.3 953,753 - -0.1 953,753 - -1.2 953,753 - -0.6 953,760 + -0.3 953,763 - +0.3 953,782 + -1.6 953,896 + DVU0862 0.14 +0.7 953,913 - DVU0862 0.16 +0.1 953,945 - DVU0862 0.20 -0.4 954,068 + DVU0862 0.33 +0.1 954,109 + DVU0862 0.38 +0.0 954,353 - DVU0862 0.65 +0.4 954,376 + DVU0862 0.67 -1.8 954,402 - DVU0862 0.70 +0.3 954,407 - DVU0862 0.71 +0.6 954,407 - DVU0862 0.71 -0.6 954,558 - DVU0862 0.87 +0.6 954,613 - -1.2 954,630 + +0.7 954,642 + -0.2 954,650 - +0.4 954,650 - +0.1 954,683 - -1.8 954,683 - +0.8 954,701 + +1.1 954,709 - +0.3 954,709 - +0.2 954,734 + -0.1 954,749 + +1.3 954,896 + DVU0863 0.12 +0.0 954,928 + DVU0863 0.14 -1.0 954,933 + DVU0863 0.14 +0.4 954,933 + DVU0863 0.14 -1.7 954,936 - DVU0863 0.15 +0.1 954,936 - DVU0863 0.15 +0.0 954,936 - DVU0863 0.15 -0.8 954,938 + DVU0863 0.15 +0.3 954,984 - DVU0863 0.17 -0.8 955,000 + DVU0863 0.18 +0.6 955,075 + DVU0863 0.23 +0.5 955,141 + DVU0863 0.26 +0.2 955,147 + DVU0863 0.27 +0.0 955,155 - DVU0863 0.27 +0.0 955,198 + DVU0863 0.30 +1.9 955,233 + DVU0863 0.32 +0.2 955,249 + DVU0863 0.33 -1.2 955,266 + DVU0863 0.34 +1.3 955,293 - DVU0863 0.35 -0.1 955,293 - DVU0863 0.35 +1.1 955,428 + DVU0863 0.43 -0.7 955,449 + DVU0863 0.44 +0.4 955,533 - DVU0863 0.49 -0.1 955,626 - DVU0863 0.55 +0.1 955,697 + DVU0863 0.59 +0.2 955,705 - DVU0863 0.59 +0.4 955,837 - DVU0863 0.67 +0.2 955,957 + DVU0863 0.74 -0.5 955,975 - DVU0863 0.75 +0.3 955,977 - DVU0863 0.75 -0.8 956,044 - DVU0863 0.79 +0.5 956,136 - DVU0863 0.84 -0.1 956,200 - DVU0863 0.88 -0.1 956,302 - +0.9 956,346 - +0.0 956,439 - +0.9 956,440 - -0.6 956,531 + +1.4 956,533 + +0.6 956,533 + -1.5 956,541 - +0.8 956,541 - +0.4 956,560 - -0.3 956,660 + DVU0864 0.14 -0.9 956,683 + DVU0864 0.17 +0.3 956,685 + DVU0864 0.17 -0.4 957,385 - +1.4 957,394 - +0.1
Or see this region's nucleotide sequence