Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0556 and DVU0557 overlap by 7 nucleotides DVU0557 and DORF28817 are separated by 66 nucleotides DORF28817 and DVU0560 are separated by 172 nucleotides DVU0560 and DVU0561 are separated by 37 nucleotides
DVU0556: DVU0556 - ISDvu3, transposase OrfA (TIGR), at 624,615 to 624,878
DVU0556
DVU0557: DVU0557 - ISDvu3, transposase OrfB, authentic point mutation (TIGR), at 624,872 to 625,726
DVU0557
DORF28817: DORF28817 - no description, at 625,793 to 626,467
DORF28817
DVU0560: DVU0560 - conserved domain protein (TIGR), at 626,640 to 627,134
DVU0560
DVU0561: DVU0561 - glycosyl transferase, group 1 family protein (TIGR), at 627,172 to 628,275
DVU0561
Position (kb) 625
626
627 Strain fitness (log2 ratio) -2
-1
0
1
2 at 624.817 kb on - strand, within DVU0556 at 624.952 kb on + strand at 624.976 kb on + strand, within DVU0557 at 624.998 kb on + strand, within DVU0557 at 625.031 kb on + strand, within DVU0557 at 625.088 kb on + strand, within DVU0557 at 625.110 kb on + strand, within DVU0557 at 625.397 kb on + strand, within DVU0557 at 625.405 kb on - strand, within DVU0557 at 625.445 kb on + strand, within DVU0557 at 625.447 kb on + strand, within DVU0557 at 625.455 kb on - strand, within DVU0557 at 625.455 kb on - strand, within DVU0557 at 625.455 kb on - strand, within DVU0557 at 625.804 kb on + strand at 626.264 kb on + strand, within DORF28817 at 626.312 kb on + strand, within DORF28817
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 624,817 - DVU0556 0.77 -0.4 624,952 + -1.0 624,976 + DVU0557 0.12 -0.9 624,998 + DVU0557 0.15 +0.2 625,031 + DVU0557 0.19 -0.5 625,088 + DVU0557 0.25 -1.1 625,110 + DVU0557 0.28 +2.0 625,397 + DVU0557 0.61 +0.2 625,405 - DVU0557 0.62 +0.1 625,445 + DVU0557 0.67 -0.4 625,447 + DVU0557 0.67 +0.0 625,455 - DVU0557 0.68 -1.4 625,455 - DVU0557 0.68 -0.4 625,455 - DVU0557 0.68 -0.8 625,804 + -0.9 626,264 + DORF28817 0.70 -0.2 626,312 + DORF28817 0.77 -2.3
Or see this region's nucleotide sequence