Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3894

Experiment: N1B4wt with N2E2m denitrifying replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E2m denitrifying replicate B
4,525,403	+		Pf6N2E2_3892	0.14	+0.3
4,525,491	-		Pf6N2E2_3892	0.32	+0.4
4,525,680	+		Pf6N2E2_3892	0.71	-0.2
4,525,680	+		Pf6N2E2_3892	0.71	+0.1
4,525,680	+		Pf6N2E2_3892	0.71	-0.0
4,525,680	+		Pf6N2E2_3892	0.71	+1.3
4,525,680	+		Pf6N2E2_3892	0.71	-0.7
4,525,680	+		Pf6N2E2_3892	0.71	+0.5
4,525,680	+		Pf6N2E2_3892	0.71	+0.0
4,525,680	+		Pf6N2E2_3892	0.71	-0.2
4,525,680	+		Pf6N2E2_3892	0.71	+1.0
4,525,680	+		Pf6N2E2_3892	0.71	+0.4
4,525,680	+		Pf6N2E2_3892	0.71	+0.3
4,525,680	+		Pf6N2E2_3892	0.71	-0.1
4,525,680	+		Pf6N2E2_3892	0.71	-0.2
4,525,680	+		Pf6N2E2_3892	0.71	-0.9
4,525,680	+		Pf6N2E2_3892	0.71	+0.2
4,525,680	+		Pf6N2E2_3892	0.71	-0.1
4,525,680	+		Pf6N2E2_3892	0.71	+1.0
4,525,680	+		Pf6N2E2_3892	0.71	+1.0
4,525,681	-		Pf6N2E2_3892	0.71	-0.4
4,525,681	-		Pf6N2E2_3892	0.71	-0.2
4,525,681	-		Pf6N2E2_3892	0.71	-0.6
4,525,681	-		Pf6N2E2_3892	0.71	-0.9
4,525,681	-		Pf6N2E2_3892	0.71	+1.0
4,525,681	-		Pf6N2E2_3892	0.71	+0.3
4,525,681	-		Pf6N2E2_3892	0.71	-0.4
4,525,681	-		Pf6N2E2_3892	0.71	+0.7
4,525,681	-		Pf6N2E2_3892	0.71	+0.4
4,525,681	-		Pf6N2E2_3892	0.71	+2.6
4,525,713	+		Pf6N2E2_3892	0.78	-0.0
4,525,714	-		Pf6N2E2_3892	0.78	-0.4
4,525,714	-		Pf6N2E2_3892	0.78	-0.8
4,525,740	+		Pf6N2E2_3892	0.84	+0.8
4,525,743	+		Pf6N2E2_3892	0.84	-0.6
4,525,743	+		Pf6N2E2_3892	0.84	+0.7
4,525,744	-		Pf6N2E2_3892	0.85	-1.3
4,525,803	+				+0.9
4,525,803	+				+1.3
4,525,807	-				-0.5
4,525,829	+				+1.3
4,525,926	+				+0.3
4,525,927	-				-0.3
4,525,974	+		Pf6N2E2_3893	0.19	-0.1
4,525,974	+		Pf6N2E2_3893	0.19	+0.4
4,525,975	-		Pf6N2E2_3893	0.19	-0.5
4,525,975	-		Pf6N2E2_3893	0.19	-0.4
4,525,975	-		Pf6N2E2_3893	0.19	+1.2
4,525,975	-		Pf6N2E2_3893	0.19	+0.7
4,526,039	-		Pf6N2E2_3893	0.34	+1.3
4,526,116	+		Pf6N2E2_3893	0.52	-0.0
4,526,116	+		Pf6N2E2_3893	0.52	-0.2
4,526,117	-		Pf6N2E2_3893	0.53	+0.7
4,526,117	-		Pf6N2E2_3893	0.53	-0.3
4,526,117	-		Pf6N2E2_3893	0.53	-1.3
4,526,117	-		Pf6N2E2_3893	0.53	-0.4
4,526,117	-		Pf6N2E2_3893	0.53	-0.7
4,526,117	-		Pf6N2E2_3893	0.53	-0.6
4,526,117	-		Pf6N2E2_3893	0.53	+0.1
4,526,117	-		Pf6N2E2_3893	0.53	+0.1
4,526,117	-		Pf6N2E2_3893	0.53	-0.5
4,526,191	+		Pf6N2E2_3893	0.70	-0.6
4,526,191	+		Pf6N2E2_3893	0.70	-0.5
4,526,191	+		Pf6N2E2_3893	0.70	-0.4
4,526,191	+		Pf6N2E2_3893	0.70	+1.3
4,526,191	+		Pf6N2E2_3893	0.70	+0.1
4,526,192	-		Pf6N2E2_3893	0.70	-0.3
4,526,192	-		Pf6N2E2_3893	0.70	+0.1
4,526,192	-		Pf6N2E2_3893	0.70	-0.9
4,526,192	-		Pf6N2E2_3893	0.70	-0.5
4,526,192	-		Pf6N2E2_3893	0.70	-0.0
4,526,192	-		Pf6N2E2_3893	0.70	+1.0
4,526,192	-		Pf6N2E2_3893	0.70	-0.5
4,526,195	+		Pf6N2E2_3893	0.71	+0.7
4,526,195	+		Pf6N2E2_3893	0.71	+0.3
4,526,196	-		Pf6N2E2_3893	0.71	-0.0
4,526,196	-		Pf6N2E2_3893	0.71	-0.6
4,526,196	-		Pf6N2E2_3893	0.71	+0.3
4,526,222	-		Pf6N2E2_3893	0.78	-2.0
4,526,222	-		Pf6N2E2_3893	0.78	-0.1
4,526,222	-		Pf6N2E2_3893	0.78	+0.2
4,526,224	+		Pf6N2E2_3893	0.78	+1.0
4,526,224	+		Pf6N2E2_3893	0.78	+0.1
4,526,224	+		Pf6N2E2_3893	0.78	+1.0
4,526,224	+		Pf6N2E2_3893	0.78	-0.4
4,526,224	+		Pf6N2E2_3893	0.78	+2.6
4,526,224	+		Pf6N2E2_3893	0.78	-0.0
4,526,224	+		Pf6N2E2_3893	0.78	-1.1
4,526,225	-		Pf6N2E2_3893	0.78	+1.0
4,526,225	-		Pf6N2E2_3893	0.78	-0.3
4,526,225	-		Pf6N2E2_3893	0.78	+0.2
4,526,225	-		Pf6N2E2_3893	0.78	+0.5
4,526,248	+		Pf6N2E2_3893	0.84	+0.2
4,526,248	+		Pf6N2E2_3893	0.84	+0.5
4,526,249	-		Pf6N2E2_3893	0.84	+0.0
4,526,277	-				-1.1
4,526,277	-				-0.4
4,526,670	+		Pf6N2E2_3894	0.25	+0.3
4,526,743	+		Pf6N2E2_3894	0.31	-0.1
4,526,744	-		Pf6N2E2_3894	0.31	+1.8
4,526,749	+		Pf6N2E2_3894	0.32	-1.1
4,526,749	+		Pf6N2E2_3894	0.32	+0.0
4,526,749	+		Pf6N2E2_3894	0.32	-0.2
4,526,749	+		Pf6N2E2_3894	0.32	-0.6
4,526,750	-		Pf6N2E2_3894	0.32	+0.3
4,526,750	-		Pf6N2E2_3894	0.32	-2.4
4,526,750	-		Pf6N2E2_3894	0.32	-1.6
4,526,750	-		Pf6N2E2_3894	0.32	-0.4
4,526,750	-		Pf6N2E2_3894	0.32	+1.0
4,526,750	-		Pf6N2E2_3894	0.32	-1.2
4,526,806	-		Pf6N2E2_3894	0.36	-0.2
4,526,884	+		Pf6N2E2_3894	0.43	-2.6
4,526,885	-		Pf6N2E2_3894	0.43	+0.3
4,526,986	+		Pf6N2E2_3894	0.51	-1.0
4,526,986	+		Pf6N2E2_3894	0.51	-1.3
4,526,986	+		Pf6N2E2_3894	0.51	-0.5
4,526,986	+		Pf6N2E2_3894	0.51	-0.3
4,526,986	+		Pf6N2E2_3894	0.51	-1.0
4,526,987	-		Pf6N2E2_3894	0.51	-0.6
4,526,987	-		Pf6N2E2_3894	0.51	-0.4
4,526,987	-		Pf6N2E2_3894	0.51	-0.7
4,526,987	-		Pf6N2E2_3894	0.51	-0.1
4,526,987	-		Pf6N2E2_3894	0.51	-0.7
4,526,987	-		Pf6N2E2_3894	0.51	-1.2
4,526,987	-		Pf6N2E2_3894	0.51	-0.1
4,527,343	+		Pf6N2E2_3894	0.80	-0.2
4,527,424	+		Pf6N2E2_3894	0.87	-0.8
4,527,424	+		Pf6N2E2_3894	0.87	+0.1
4,527,424	+		Pf6N2E2_3894	0.87	+0.2
4,527,424	+		Pf6N2E2_3894	0.87	+0.4
4,527,424	+		Pf6N2E2_3894	0.87	+0.2
4,527,424	+		Pf6N2E2_3894	0.87	-0.6
4,527,424	+		Pf6N2E2_3894	0.87	-0.2
4,527,425	-		Pf6N2E2_3894	0.87	-0.2
4,527,425	-		Pf6N2E2_3894	0.87	+1.2
4,527,425	-		Pf6N2E2_3894	0.87	-0.3
4,527,425	-		Pf6N2E2_3894	0.87	-0.2
4,527,425	-		Pf6N2E2_3894	0.87	-0.2
4,527,657	-				-0.4
4,527,739	-				+0.5
4,527,756	+				+0.1
4,527,757	-				-1.0
4,527,757	-				+0.2
4,528,008	+		Pf6N2E2_3895	0.16	-0.7
4,528,009	-		Pf6N2E2_3895	0.16	+0.2
4,528,104	+		Pf6N2E2_3895	0.21	+0.7
4,528,104	+		Pf6N2E2_3895	0.21	+0.5
4,528,104	+		Pf6N2E2_3895	0.21	+0.4
4,528,104	+		Pf6N2E2_3895	0.21	-0.1
4,528,104	+		Pf6N2E2_3895	0.21	-0.5
4,528,105	-		Pf6N2E2_3895	0.21	+0.1
4,528,105	-		Pf6N2E2_3895	0.21	-0.4
4,528,105	-		Pf6N2E2_3895	0.21	-0.1
4,528,105	-		Pf6N2E2_3895	0.21	-0.1
4,528,105	-		Pf6N2E2_3895	0.21	-0.1
4,528,105	-		Pf6N2E2_3895	0.21	-0.5
4,528,105	-		Pf6N2E2_3895	0.21	+1.0
4,528,135	+		Pf6N2E2_3895	0.23	-0.8
4,528,161	+		Pf6N2E2_3895	0.24	-0.6
4,528,161	+		Pf6N2E2_3895	0.24	+0.9
4,528,161	+		Pf6N2E2_3895	0.24	-1.1
4,528,161	+		Pf6N2E2_3895	0.24	-1.0
4,528,162	-		Pf6N2E2_3895	0.24	-0.1
4,528,162	-		Pf6N2E2_3895	0.24	-0.5
4,528,215	+		Pf6N2E2_3895	0.27	-0.3
4,528,215	+		Pf6N2E2_3895	0.27	+0.4
4,528,215	+		Pf6N2E2_3895	0.27	+0.7
4,528,216	-		Pf6N2E2_3895	0.27	-0.1
4,528,216	-		Pf6N2E2_3895	0.27	-0.6
4,528,216	-		Pf6N2E2_3895	0.27	-0.1
4,528,216	-		Pf6N2E2_3895	0.27	-1.3
4,528,254	+		Pf6N2E2_3895	0.29	-1.4
4,528,263	+		Pf6N2E2_3895	0.29	+0.8
4,528,263	+		Pf6N2E2_3895	0.29	-0.5
4,528,264	-		Pf6N2E2_3895	0.29	+0.2
4,528,410	+		Pf6N2E2_3895	0.37	+0.6
4,528,410	+		Pf6N2E2_3895	0.37	-0.6
4,528,410	+		Pf6N2E2_3895	0.37	+0.3
4,528,411	-		Pf6N2E2_3895	0.37	-0.7
4,528,416	+		Pf6N2E2_3895	0.37	+0.2