Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1599

Experiment: N1B4wt with N2E2m denitrifying replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	N1B4wt with N2E2m denitrifying replicate B
1,870,520	-		Pf6N2E2_1597	0.81	-0.2
1,870,549	+		Pf6N2E2_1597	0.83	+0.3
1,870,624	+		Pf6N2E2_1597	0.86	-0.4
1,870,729	+		Pf6N2E2_1597	0.90	-0.5
1,870,865	+				-0.2
1,870,866	-				-0.4
1,871,184	+		Pf6N2E2_1598	0.38	-0.3
1,871,319	+		Pf6N2E2_1598	0.66	-1.6
1,871,320	-		Pf6N2E2_1598	0.66	+0.4
1,871,368	-		Pf6N2E2_1598	0.76	-0.4
1,871,404	+		Pf6N2E2_1598	0.84	+1.2
1,871,404	+		Pf6N2E2_1598	0.84	+1.4
1,871,405	-		Pf6N2E2_1598	0.84	+0.4
1,871,405	-		Pf6N2E2_1598	0.84	+1.3
1,871,524	-				-0.0
1,871,553	+		Pf6N2E2_1599	0.10	+0.6
1,871,554	-		Pf6N2E2_1599	0.10	-0.9
1,871,554	-		Pf6N2E2_1599	0.10	+1.3
1,871,554	-		Pf6N2E2_1599	0.10	+1.0
1,871,554	-		Pf6N2E2_1599	0.10	-0.9
1,871,554	-		Pf6N2E2_1599	0.10	+0.3
1,871,554	-		Pf6N2E2_1599	0.10	-0.0
1,871,554	-		Pf6N2E2_1599	0.10	+0.3
1,871,557	-		Pf6N2E2_1599	0.11	-0.1
1,871,557	-		Pf6N2E2_1599	0.11	-1.3
1,871,715	+		Pf6N2E2_1599	0.37	+0.3
1,871,781	-		Pf6N2E2_1599	0.48	+0.4
1,872,224	-				+0.1
1,872,224	-				+0.2
1,872,224	-				+0.7
1,872,224	-				+1.4
1,872,370	+				-0.4
1,872,370	+				-1.2
1,872,524	-		Pf6N2E2_1600	0.18	-0.9
1,872,524	-		Pf6N2E2_1600	0.18	+0.3
1,872,982	+		Pf6N2E2_1600	0.46	+1.4