Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_5873

Experiment: Dimethyl Sulfoxide 6.5 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt Pf1N1B4_5873 - Mobile element protein, at 313,170 to 314,183 _5873 Position (kb) 313 314 315Strain fitness (log2 ratio) -3 -2 -1 0 1at 312.580 kb on + strandat 312.941 kb on + strandat 313.054 kb on + strandat 314.629 kb on + strandat 314.630 kb on - strandat 314.630 kb on - strandat 314.774 kb on + strandat 314.942 kb on + strandat 314.943 kb on - strandat 314.943 kb on - strandat 314.946 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 6.5 vol%
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312,580 + -2.5
312,941 + -1.0
313,054 + -1.2
314,629 + +1.2
314,630 - -0.2
314,630 - +0.7
314,774 + +0.5
314,942 + +0.6
314,943 - -0.2
314,943 - -2.8
314,946 + -0.2

Or see this region's nucleotide sequence