Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4437
Experiment: Dimethyl Sulfoxide 6.5 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 6.5 vol% |
|---|---|---|---|---|---|
| remove | |||||
| 4,896,250 | + | +1.7 | |||
| 4,896,250 | + | -0.5 | |||
| 4,896,251 | - | +0.3 | |||
| 4,896,302 | - | Pf1N1B4_4436 | 0.13 | -1.3 | |
| 4,896,646 | + | Pf1N1B4_4436 | 0.51 | -0.2 | |
| 4,896,736 | + | Pf1N1B4_4436 | 0.61 | -0.5 | |
| 4,896,892 | + | +0.5 | |||
| 4,896,892 | + | Pf1N1B4_4436 | 0.78 | -0.5 | |
| 4,897,437 | + | Pf1N1B4_4437 | 0.24 | -1.5 | |
| 4,897,455 | + | Pf1N1B4_4437 | 0.26 | -1.5 | |
| 4,897,712 | + | Pf1N1B4_4437 | 0.49 | +0.5 | |
| 4,897,712 | + | Pf1N1B4_4437 | 0.49 | -2.1 | |
| 4,897,960 | + | Pf1N1B4_4437 | 0.71 | -0.7 | |
| 4,897,960 | + | Pf1N1B4_4437 | 0.71 | -0.5 | |
| 4,897,960 | + | Pf1N1B4_4437 | 0.71 | -0.9 | |
| 4,897,961 | - | Pf1N1B4_4437 | 0.71 | -1.5 | |
| 4,897,961 | - | Pf1N1B4_4437 | 0.71 | -0.7 | |
| 4,898,205 | + | -0.2 | |||
| 4,898,206 | - | -0.5 | |||
| 4,898,921 | + | Pf1N1B4_4438 | 0.37 | -0.5 | |
| 4,898,922 | - | Pf1N1B4_4438 | 0.37 | +0.9 | |
| 4,898,922 | - | Pf1N1B4_4438 | 0.37 | -0.5 |
Or see this region's nucleotide sequence