Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_2194

Experiment: Dimethyl Sulfoxide 6.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 6.5 vol%
2,504,720	+		Pf1N1B4_2192	0.70	-0.7
2,504,721	-		Pf1N1B4_2192	0.70	+1.1
2,504,721	-		Pf1N1B4_2192	0.70	+1.1
2,504,819	+		Pf1N1B4_2192	0.79	-0.2
2,504,819	+		Pf1N1B4_2192	0.79	+0.5
2,504,819	+		Pf1N1B4_2192	0.79	-1.8
2,504,819	+		Pf1N1B4_2192	0.79	+0.7
2,504,820	-		Pf1N1B4_2192	0.79	+0.2
2,504,820	-		Pf1N1B4_2192	0.79	-1.1
2,504,974	+				+0.3
2,505,057	+				-1.7
2,505,057	+				+1.8
2,505,057	+				+0.3
2,505,057	+				+1.0
2,505,058	-				-0.8
2,505,058	-				-1.0
2,505,058	-				+0.3
2,505,058	-				-1.7
2,505,058	-				-1.2
2,505,236	+		Pf1N1B4_2193	0.39	+0.9
2,505,237	-		Pf1N1B4_2193	0.39	+1.3
2,505,237	-		Pf1N1B4_2193	0.39	-1.0
2,505,237	-		Pf1N1B4_2193	0.39	-0.4
2,505,345	-		Pf1N1B4_2193	0.62	-0.3
2,505,382	+		Pf1N1B4_2193	0.70	-0.5
2,505,382	+		Pf1N1B4_2193	0.70	+0.3
2,505,383	-		Pf1N1B4_2193	0.70	+0.7
2,505,483	+				+1.3
2,505,483	+				-0.5
2,505,483	+				+0.1
2,505,483	+				-1.7
2,505,483	+				+0.7
2,505,483	+				+0.9
2,505,483	+				+0.0
2,505,483	+				+1.1
2,505,483	+				-0.7
2,505,483	+				+0.1
2,505,483	+				-0.5
2,505,483	+				-1.7
2,505,483	+				-1.7
2,505,484	-				-1.2
2,505,484	-				+0.3
2,505,484	-				-1.0
2,505,484	-				+0.9
2,505,520	+				+0.3
2,505,520	+				-0.1
2,505,520	+				+0.8
2,505,520	+				+1.1
2,505,520	+				-1.0
2,505,520	+				+0.8
2,505,520	+				-0.1
2,505,520	+				-1.7
2,505,520	+				+0.9
2,505,520	+				-0.7
2,505,520	+				-0.8
2,505,520	+				+0.9
2,505,520	+				+0.3
2,505,521	-				-0.1
2,505,521	-				-0.4
2,505,521	-				+0.3
2,505,521	-				-0.7
2,505,521	-				+0.3
2,505,521	-				+1.3
2,505,521	-				+0.9
2,505,521	-				+0.3
2,505,521	-				+1.1
2,505,521	-				-1.7
2,505,521	-				-0.2
2,505,521	-				+0.8
2,505,521	-				+0.3
2,505,521	-				+0.8
2,505,521	-				-0.7
2,505,521	-				+0.8
2,505,526	+				+0.2
2,505,526	+				+1.1
2,505,526	+				+0.3
2,505,554	+				-0.2
2,505,570	+				-0.2
2,505,570	+				+0.7
2,505,596	+				+0.1
2,505,596	+				-1.7
2,505,597	-				-0.7
2,505,621	-				+1.1
2,505,817	+		Pf1N1B4_2194	0.13	+0.0
2,505,818	-		Pf1N1B4_2194	0.13	-2.0
2,505,818	-		Pf1N1B4_2194	0.13	-0.7
2,506,010	+		Pf1N1B4_2194	0.23	+0.8
2,506,010	+		Pf1N1B4_2194	0.23	+0.3
2,506,011	-		Pf1N1B4_2194	0.23	+0.3
2,506,011	-		Pf1N1B4_2194	0.23	+1.5
2,506,011	-		Pf1N1B4_2194	0.23	+0.3
2,506,147	-		Pf1N1B4_2194	0.30	-1.7
2,506,147	-				+2.3
2,506,217	+		Pf1N1B4_2194	0.34	+1.0
2,506,249	+		Pf1N1B4_2194	0.35	+0.3
2,506,315	+		Pf1N1B4_2194	0.39	+1.9
2,506,315	+		Pf1N1B4_2194	0.39	+0.6
2,506,354	+		Pf1N1B4_2194	0.41	+0.8
2,506,354	+		Pf1N1B4_2194	0.41	+0.3
2,506,354	+		Pf1N1B4_2194	0.41	+0.3
2,506,354	+		Pf1N1B4_2194	0.41	+2.7
2,506,355	-		Pf1N1B4_2194	0.41	-0.0
2,506,355	-		Pf1N1B4_2194	0.41	-1.1
2,506,355	-		Pf1N1B4_2194	0.41	+0.9
2,506,355	-		Pf1N1B4_2194	0.41	-0.3
2,507,050	-		Pf1N1B4_2194	0.77	+1.3
2,507,050	-		Pf1N1B4_2194	0.77	+0.3
2,507,062	+		Pf1N1B4_2194	0.78	+0.9
2,507,063	-		Pf1N1B4_2194	0.78	+0.3
2,507,113	+		Pf1N1B4_2194	0.81	+0.3
2,507,114	-		Pf1N1B4_2194	0.81	+1.7
2,507,135	-		Pf1N1B4_2194	0.82	-0.7
2,507,335	+				+1.7
2,507,335	+				+0.3
2,507,335	+				-0.2
2,507,335	+				-1.7
2,507,336	-				+0.5
2,507,568	+		Pf1N1B4_2195	0.15	+1.9
2,507,568	+		Pf1N1B4_2195	0.15	-0.4
2,507,569	-				+0.3
2,507,592	-		Pf1N1B4_2195	0.19	+0.3
2,507,828	+		Pf1N1B4_2195	0.60	-0.2
2,507,925	+		Pf1N1B4_2195	0.76	+0.7
2,507,926	-		Pf1N1B4_2195	0.76	-2.5
2,508,060	+				+1.1
2,508,060	+				+3.2
2,508,060	+				-1.0
2,508,060	+				+1.3
2,508,214	+				+0.8
2,508,278	+				+1.0
2,508,278	+				+0.7
2,508,278	+				-0.4
2,508,278	+				+2.7
2,508,279	-				-0.4
2,508,283	+				+0.3
2,508,283	+				+0.9
2,508,284	-				-0.7
2,508,284	-				-0.2
2,508,284	-				+1.1
2,508,284	-				+0.3
2,508,284	-				+0.9