Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_003373

Experiment: Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
3,794,140	+		ABIE53_003371	0.14	-1.7
3,794,140	+		ABIE53_003371	0.14	+0.3
3,794,140	+		ABIE53_003371	0.14	+0.5
3,794,140	+		ABIE53_003371	0.14	-0.3
3,794,140	+		ABIE53_003371	0.14	-0.7
3,794,140	+		ABIE53_003371	0.14	-1.3
3,794,140	+		ABIE53_003371	0.14	+1.5
3,794,140	+		ABIE53_003371	0.14	+1.9
3,794,140	+		ABIE53_003371	0.14	-0.3
3,794,140	+		ABIE53_003371	0.14	-1.7
3,794,141	-		ABIE53_003371	0.14	+1.7
3,794,141	-		ABIE53_003371	0.14	+1.1
3,794,141	-		ABIE53_003371	0.14	-2.7
3,794,141	-		ABIE53_003371	0.14	+1.6
3,794,141	-		ABIE53_003371	0.14	+0.6
3,794,141	-		ABIE53_003371	0.14	+1.1
3,794,142	+		ABIE53_003371	0.14	-0.8
3,794,142	+		ABIE53_003371	0.14	-1.1
3,794,143	-		ABIE53_003371	0.14	+1.1
3,794,143	-		ABIE53_003371	0.14	-1.6
3,794,205	+		ABIE53_003371	0.21	+0.4
3,794,206	-		ABIE53_003371	0.21	-1.7
3,794,226	+		ABIE53_003371	0.24	-0.8
3,794,226	+		ABIE53_003371	0.24	+1.3
3,794,226	+		ABIE53_003371	0.24	-2.2
3,794,226	+		ABIE53_003371	0.24	-0.6
3,794,226	+		ABIE53_003371	0.24	+1.2
3,794,227	-		ABIE53_003371	0.24	-1.3
3,794,469	+		ABIE53_003371	0.52	+0.1
3,794,469	+		ABIE53_003371	0.52	-0.3
3,794,469	+		ABIE53_003371	0.52	-2.6
3,794,469	+		ABIE53_003371	0.52	-0.4
3,794,469	+		ABIE53_003371	0.52	+0.3
3,794,470	-		ABIE53_003371	0.52	-0.1
3,794,470	-		ABIE53_003371	0.52	-0.0
3,794,470	-		ABIE53_003371	0.52	-0.3
3,794,470	-		ABIE53_003371	0.52	+0.1
3,794,599	-		ABIE53_003371	0.67	+0.4
3,794,632	+		ABIE53_003371	0.71	+0.1
3,794,632	+		ABIE53_003371	0.71	-0.3
3,794,781	+		ABIE53_003371	0.89	+0.8
3,794,782	-		ABIE53_003371	0.89	-1.2
3,794,845	+				+1.9
3,794,845	+				-0.3
3,794,845	+				+1.5
3,794,845	+				-0.0
3,794,845	+				-1.8
3,794,846	-				-0.5
3,794,846	-				-1.7
3,794,846	-				+1.3
3,794,848	+				-0.2
3,794,848	+				+1.1
3,794,848	+				-2.4
3,794,848	+				-0.3
3,794,848	+				-0.3
3,794,848	+				+0.0
3,794,848	+				-0.4
3,794,848	+				-0.3
3,794,849	-				-0.4
3,794,849	-				+0.1
3,794,849	-				+0.9
3,794,849	-				-1.6
3,794,849	-				+1.0
3,794,849	-				+1.6
3,794,850	-				-1.6
3,794,945	+		ABIE53_003372	0.35	+1.8
3,795,075	+				-0.0
3,795,075	+				-1.6
3,795,075	+				-0.5
3,795,075	+				-0.3
3,795,075	+				-0.0
3,795,075	+				-2.6
3,795,075	+				-0.6
3,795,075	+				+1.0
3,795,075	+				-1.7
3,795,075	+				-1.7
3,795,075	+				-2.3
3,795,076	+				+2.3
3,795,076	-				-1.9
3,795,076	-				-3.1
3,795,076	-				+0.1
3,795,076	-				-0.1
3,795,076	-				+0.7
3,795,076	-				+0.3
3,795,076	-				-1.9
3,795,076	-				-0.3
3,795,076	-				-1.7
3,795,079	+				-3.6
3,795,079	+				+1.3
3,795,079	+				+0.9
3,795,079	+				-0.1
3,795,079	+				-0.3
3,795,079	+				+1.3
3,795,079	+				+0.6
3,795,079	+				+0.6
3,795,080	-				-0.2
3,795,080	-				+1.3
3,795,080	-				-2.7
3,795,080	-				+0.8
3,795,080	-				-2.8
3,795,080	-				+0.6
3,795,080	-				-1.9
3,795,080	-				+4.7
3,795,080	-				-1.7
3,795,080	-				+1.3
3,795,080	-				-0.7
3,795,080	-				+1.3
3,795,080	-				-1.6
3,795,081	+				-0.5
3,795,081	+				-1.3
3,795,081	+				+0.3
3,795,095	+				+1.5
3,795,096	-				+0.3
3,795,096	-				-1.3
3,795,096	-				-2.8
3,795,106	+				-0.6
3,795,106	+				+0.1
3,795,106	+				-0.8
3,795,106	+				-0.6
3,795,106	+				-1.1
3,795,107	-				-1.1
3,795,763	+				+1.6
3,795,763	+				-2.1
3,795,763	+				+0.4
3,795,763	+				-1.6
3,795,764	-				+0.3
3,795,764	-				-2.0
3,795,764	-				-2.1
3,795,764	-				+0.5
3,795,764	-				-2.3
3,795,791	+				+0.2
3,795,791	+				-0.9
3,795,791	+				-1.9
3,795,792	-				-1.7
3,795,792	-				-3.2
3,795,792	-				-2.9
3,795,792	-				+0.7
3,795,792	-				-0.7
3,795,792	-				-2.9
3,795,792	-				+1.3
3,795,872	+				-0.1
3,795,872	+				-0.2
3,795,938	+				-1.8
3,795,939	-				-2.7
3,796,057	+		ABIE53_003374	0.13	-0.0
3,796,057	+		ABIE53_003374	0.13	+0.3
3,796,057	+		ABIE53_003374	0.13	+0.3
3,796,058	-		ABIE53_003374	0.13	-1.6
3,796,058	-		ABIE53_003374	0.13	-1.6
3,796,058	-		ABIE53_003374	0.13	-1.9
3,796,058	-		ABIE53_003374	0.13	-2.1
3,796,058	-		ABIE53_003374	0.13	-1.1
3,796,058	-		ABIE53_003374	0.13	-0.3
3,796,058	-		ABIE53_003374	0.13	-2.7
3,796,096	+		ABIE53_003374	0.16	-2.7
3,796,096	+		ABIE53_003374	0.16	-0.2
3,796,097	-		ABIE53_003374	0.16	+0.3
3,796,097	-		ABIE53_003374	0.16	-2.3
3,796,097	-		ABIE53_003374	0.16	-1.1
3,796,097	-		ABIE53_003374	0.16	-2.6
3,796,097	-		ABIE53_003374	0.16	-3.9
3,796,179	+		ABIE53_003374	0.23	-2.4
3,796,179	+		ABIE53_003374	0.23	-2.2
3,796,180	-		ABIE53_003374	0.23	-0.3
3,796,180	-		ABIE53_003374	0.23	-1.3
3,796,236	+		ABIE53_003374	0.28	-3.3
3,796,253	-		ABIE53_003374	0.29	-1.1
3,796,253	-		ABIE53_003374	0.29	-4.3
3,796,258	+		ABIE53_003374	0.30	-0.7
3,796,258	+		ABIE53_003374	0.30	-2.3
3,796,258	+		ABIE53_003374	0.30	-1.1
3,796,258	+		ABIE53_003374	0.30	-1.9
3,796,258	+		ABIE53_003374	0.30	-1.3
3,796,258	+		ABIE53_003374	0.30	-1.6
3,796,258	+		ABIE53_003374	0.30	-2.3
3,796,258	+		ABIE53_003374	0.30	-4.8
3,796,259	-		ABIE53_003374	0.30	-1.3
3,796,259	-		ABIE53_003374	0.30	-0.7
3,796,259	-		ABIE53_003374	0.30	-4.1
3,796,259	-		ABIE53_003374	0.30	-0.7
3,796,259	-		ABIE53_003374	0.30	-1.7
3,796,259	-		ABIE53_003374	0.30	-1.9
3,796,259	-		ABIE53_003374	0.30	-1.1
3,796,259	-		ABIE53_003374	0.30	-2.2
3,796,259	-		ABIE53_003374	0.30	-2.9
3,796,279	+		ABIE53_003374	0.31	-3.7
3,796,279	+		ABIE53_003374	0.31	-1.3
3,796,279	+		ABIE53_003374	0.31	-2.7
3,796,279	+		ABIE53_003374	0.31	-1.2
3,796,279	+		ABIE53_003374	0.31	-1.6
3,796,279	+		ABIE53_003374	0.31	-0.3
3,796,279	+		ABIE53_003374	0.31	-2.4
3,796,279	+		ABIE53_003374	0.31	-0.6
3,796,279	+		ABIE53_003374	0.31	-2.1
3,796,280	-		ABIE53_003374	0.31	-4.0
3,796,280	-		ABIE53_003374	0.31	-2.3
3,796,280	-		ABIE53_003374	0.31	-2.9
3,796,280	-		ABIE53_003374	0.31	-5.3
3,796,280	-		ABIE53_003374	0.31	-2.9
3,796,280	-		ABIE53_003374	0.31	-2.3
3,796,280	-		ABIE53_003374	0.31	-1.6
3,796,280	-		ABIE53_003374	0.31	-4.5
3,796,280	-		ABIE53_003374	0.31	-1.7
3,796,309	+		ABIE53_003374	0.34	-0.3
3,796,309	+		ABIE53_003374	0.34	-1.9
3,796,309	+		ABIE53_003374	0.34	-3.6
3,796,309	+		ABIE53_003374	0.34	+0.3
3,796,309	+		ABIE53_003374	0.34	+1.3
3,796,310	-		ABIE53_003374	0.34	-0.7
3,796,310	-		ABIE53_003374	0.34	+1.8
3,796,310	-		ABIE53_003374	0.34	+0.9
3,796,310	-		ABIE53_003374	0.34	-1.6
3,796,310	-		ABIE53_003374	0.34	-1.6
3,796,321	+		ABIE53_003374	0.35	-3.4
3,796,322	-		ABIE53_003374	0.35	-1.6
3,796,660	+		ABIE53_003374	0.63	-0.0
3,796,660	+		ABIE53_003374	0.63	+1.3
3,796,661	-		ABIE53_003374	0.63	-1.6