Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_000140

Experiment: Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=no_plant; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
144,483	+		ABIE53_000138	0.37	-0.9
144,483	+		ABIE53_000138	0.37	-1.9
144,483	+		ABIE53_000138	0.37	-1.2
144,483	+		ABIE53_000138	0.37	-1.2
144,483	+		ABIE53_000138	0.37	-2.8
144,483	+		ABIE53_000138	0.37	-1.5
144,483	+		ABIE53_000138	0.37	-1.7
144,483	+		ABIE53_000138	0.37	-0.5
144,483	+		ABIE53_000138	0.37	+1.4
144,484	-		ABIE53_000138	0.38	+1.4
144,484	-		ABIE53_000138	0.38	+0.3
144,484	-		ABIE53_000138	0.38	+3.6
144,484	-		ABIE53_000138	0.38	+0.8
144,484	-		ABIE53_000138	0.38	+1.1
144,484	-		ABIE53_000138	0.38	+1.4
144,484	-		ABIE53_000138	0.38	-0.1
144,484	-		ABIE53_000138	0.38	-1.3
144,484	-		ABIE53_000138	0.38	+0.1
144,484	-		ABIE53_000138	0.38	-1.9
144,516	+		ABIE53_000138	0.45	-0.7
144,516	+		ABIE53_000138	0.45	-0.4
144,516	+		ABIE53_000138	0.45	-1.4
144,516	+		ABIE53_000138	0.45	-0.3
144,516	+		ABIE53_000138	0.45	-0.0
144,516	+		ABIE53_000138	0.45	-0.6
144,516	+		ABIE53_000138	0.45	-0.8
144,516	+		ABIE53_000138	0.45	+1.1
144,516	+		ABIE53_000138	0.45	+0.6
144,516	+		ABIE53_000138	0.45	-1.2
144,516	+		ABIE53_000138	0.45	-0.1
144,517	-		ABIE53_000138	0.45	-0.5
144,517	-		ABIE53_000138	0.45	-0.9
144,517	-		ABIE53_000138	0.45	-1.9
144,517	-		ABIE53_000138	0.45	+0.7
144,517	-		ABIE53_000138	0.45	+0.9
144,517	-		ABIE53_000138	0.45	+1.0
144,517	-		ABIE53_000138	0.45	-2.2
144,517	-		ABIE53_000138	0.45	+1.7
144,517	-		ABIE53_000138	0.45	-1.5
144,517	-		ABIE53_000138	0.45	+0.1
144,518	+		ABIE53_000138	0.46	-0.5
144,519	-		ABIE53_000138	0.46	+1.7
144,549	+		ABIE53_000138	0.53	+2.4
144,549	+		ABIE53_000138	0.53	-2.0
144,549	+		ABIE53_000138	0.53	-0.9
144,549	+		ABIE53_000138	0.53	-2.2
144,549	+		ABIE53_000138	0.53	+0.4
144,549	+		ABIE53_000138	0.53	-0.2
144,549	+		ABIE53_000138	0.53	+0.8
144,549	+		ABIE53_000138	0.53	-1.0
144,549	+		ABIE53_000138	0.53	+0.3
144,549	+		ABIE53_000138	0.53	+0.4
144,549	+		ABIE53_000138	0.53	+1.5
144,549	+		ABIE53_000138	0.53	+0.9
144,549	+		ABIE53_000138	0.53	-1.2
144,549	+		ABIE53_000138	0.53	-0.2
144,550	-		ABIE53_000138	0.53	+1.1
144,550	-		ABIE53_000138	0.53	+0.3
144,550	-		ABIE53_000138	0.53	+0.4
144,550	-		ABIE53_000138	0.53	+1.1
144,550	-		ABIE53_000138	0.53	-2.3
144,550	-		ABIE53_000138	0.53	+0.9
144,550	-		ABIE53_000138	0.53	-1.8
144,609	+		ABIE53_000138	0.67	-1.2
144,609	+		ABIE53_000138	0.67	+0.1
144,609	+		ABIE53_000138	0.67	-0.4
144,609	+		ABIE53_000138	0.67	-0.4
144,609	+		ABIE53_000138	0.67	+0.5
144,609	+		ABIE53_000138	0.67	+2.0
144,610	-		ABIE53_000138	0.67	+1.1
144,610	-		ABIE53_000138	0.67	-2.3
144,610	-		ABIE53_000138	0.67	-0.1
144,610	-		ABIE53_000138	0.67	+1.1
144,610	-		ABIE53_000138	0.67	+0.7
144,610	-		ABIE53_000138	0.67	-0.1
144,610	-		ABIE53_000138	0.67	-1.5
144,610	-		ABIE53_000138	0.67	-1.9
144,610	-		ABIE53_000138	0.67	+0.3
144,610	-		ABIE53_000138	0.67	-0.6
144,635	+		ABIE53_000138	0.73	-1.5
144,635	+		ABIE53_000138	0.73	+3.3
144,635	+		ABIE53_000138	0.73	-3.0
144,635	+		ABIE53_000138	0.73	-0.9
144,635	+		ABIE53_000138	0.73	-0.8
144,636	-		ABIE53_000138	0.73	+1.3
144,636	-		ABIE53_000138	0.73	-1.1
144,636	-		ABIE53_000138	0.73	+0.1
144,636	-		ABIE53_000138	0.73	-1.1
144,636	-		ABIE53_000138	0.73	-2.8
144,636	-		ABIE53_000138	0.73	+1.6
144,636	-		ABIE53_000138	0.73	-2.5
144,747	+				-1.5
144,748	-				-0.6
144,753	+				+0.9
144,753	+				-0.9
144,753	+				-2.0
144,753	+				+0.1
144,753	+				-2.2
144,753	+				+1.1
144,753	+				-0.9
144,753	+				+0.1
144,754	-				+1.1
144,754	-				-0.2
144,754	-				-0.1
144,754	-				-1.5
144,754	-				-1.4
144,754	-				-2.6
144,754	-				+0.0
144,754	-				-0.3
144,754	-				+0.8
144,805	+				-3.3
144,806	-				-0.7
144,876	+				-0.9
144,876	+				-1.9
144,876	+				-2.0
144,876	+				+0.1
144,876	+				-0.6
144,877	-				+0.1
144,877	-				+0.2
144,877	-				+0.5
144,877	-				-0.1
144,877	-				-2.2
144,877	-				-3.1
145,295	-				-3.1
145,295	-				-1.7
145,295	-				-2.2
145,295	-				+1.1
145,409	+				-1.5
145,410	-				-3.1
145,410	-				+1.5
145,410	-				-0.4
145,410	-				-0.2
145,410	-				+1.1
145,420	+				-0.9
145,420	+				-0.0
145,427	+				+0.7
145,427	+				-1.5
145,428	-				+0.1
145,428	-				-1.9
145,428	-				+3.3
145,428	-				-0.8
145,610	+		ABIE53_000140	0.17	+1.5
145,610	+		ABIE53_000140	0.17	-2.5
145,610	+		ABIE53_000140	0.17	-1.0
145,675	+		ABIE53_000140	0.24	-2.2
145,675	+		ABIE53_000140	0.24	-0.2
145,675	+		ABIE53_000140	0.24	+1.1
145,675	+		ABIE53_000140	0.24	+1.0
145,675	+		ABIE53_000140	0.24	-0.5
145,676	-		ABIE53_000140	0.24	+1.1
145,676	-		ABIE53_000140	0.24	+3.1
145,676	-		ABIE53_000140	0.24	-1.1
145,676	-		ABIE53_000140	0.24	-0.0
145,729	+		ABIE53_000140	0.30	+0.2
145,729	+		ABIE53_000140	0.30	-1.2
145,729	+		ABIE53_000140	0.30	-0.3
145,730	-		ABIE53_000140	0.30	+1.9
145,765	+		ABIE53_000140	0.34	-2.2
145,765	+		ABIE53_000140	0.34	+0.1
145,765	+		ABIE53_000140	0.34	+0.0
145,765	+		ABIE53_000140	0.34	+0.1
145,765	+		ABIE53_000140	0.34	+0.6
145,766	-		ABIE53_000140	0.34	-1.7
145,766	-		ABIE53_000140	0.34	+0.0
145,766	-		ABIE53_000140	0.34	-0.5
145,766	-		ABIE53_000140	0.34	-1.5
145,766	-		ABIE53_000140	0.34	-0.7
145,766	-		ABIE53_000140	0.34	-0.5
145,766	-		ABIE53_000140	0.34	-0.9
145,766	-		ABIE53_000140	0.34	-1.2
145,786	+		ABIE53_000140	0.36	-0.2
145,786	+		ABIE53_000140	0.36	-0.9
145,786	+		ABIE53_000140	0.36	-0.5
145,787	-		ABIE53_000140	0.36	+0.3
145,787	-		ABIE53_000140	0.36	-1.2
145,787	-		ABIE53_000140	0.36	-2.7
145,787	-		ABIE53_000140	0.36	+1.7
145,819	+		ABIE53_000140	0.39	+1.3
145,820	-		ABIE53_000140	0.39	+0.0
145,834	+		ABIE53_000140	0.41	-3.7
145,835	-		ABIE53_000140	0.41	+0.1
145,843	+		ABIE53_000140	0.42	+0.4
145,843	+		ABIE53_000140	0.42	-0.2
145,843	+		ABIE53_000140	0.42	+2.4
145,843	+		ABIE53_000140	0.42	-0.1
145,843	+		ABIE53_000140	0.42	-0.8
145,843	+		ABIE53_000140	0.42	-2.5
145,843	+		ABIE53_000140	0.42	-1.5
145,844	-		ABIE53_000140	0.42	+1.3
145,844	-		ABIE53_000140	0.42	+0.5
145,844	-		ABIE53_000140	0.42	-4.0
145,844	-		ABIE53_000140	0.42	+1.1
145,844	-		ABIE53_000140	0.42	-0.6
145,844	-		ABIE53_000140	0.42	+0.6
145,844	-		ABIE53_000140	0.42	-0.1
145,864	+		ABIE53_000140	0.44	-0.6
145,864	+		ABIE53_000140	0.44	-0.9
145,865	-		ABIE53_000140	0.44	-0.5
145,865	-		ABIE53_000140	0.44	+0.3
145,879	+		ABIE53_000140	0.46	-0.3
145,879	+		ABIE53_000140	0.46	-2.2
145,879	+		ABIE53_000140	0.46	-0.0
145,880	-		ABIE53_000140	0.46	+0.4
145,924	+		ABIE53_000140	0.50	-1.2
145,925	-		ABIE53_000140	0.51	+0.8
145,925	-		ABIE53_000140	0.51	+0.3
145,925	-		ABIE53_000140	0.51	-0.5
145,925	-		ABIE53_000140	0.51	-0.8
145,925	-		ABIE53_000140	0.51	-1.4
145,925	-		ABIE53_000140	0.51	+1.3
145,976	-		ABIE53_000140	0.56	+0.6
146,029	+		ABIE53_000140	0.62	-0.9
146,029	+		ABIE53_000140	0.62	+3.9
146,030	-		ABIE53_000140	0.62	+1.1
146,030	-		ABIE53_000140	0.62	-0.9
146,030	-		ABIE53_000140	0.62	+1.1
146,030	-		ABIE53_000140	0.62	-0.2
146,030	-		ABIE53_000140	0.62	-1.6
146,030	-		ABIE53_000140	0.62	+1.6
146,041	+		ABIE53_000140	0.63	+0.7
146,041	+		ABIE53_000140	0.63	+2.6
146,041	+		ABIE53_000140	0.63	+1.7
146,041	+		ABIE53_000140	0.63	+1.3
146,041	+		ABIE53_000140	0.63	+0.1
146,042	-		ABIE53_000140	0.63	-0.0
146,165	+		ABIE53_000140	0.76	+2.3
146,233	+		ABIE53_000140	0.83	-1.2
146,233	+		ABIE53_000140	0.83	+1.1
146,233	+		ABIE53_000140	0.83	-0.0
146,233	+		ABIE53_000140	0.83	-0.2
146,234	-		ABIE53_000140	0.83	-1.7
146,234	-		ABIE53_000140	0.83	-2.5
146,234	-		ABIE53_000140	0.83	-0.3
146,234	-		ABIE53_000140	0.83	+0.1
146,234	-		ABIE53_000140	0.83	+0.0
146,325	+				-0.8
146,325	+				-0.5
146,326	-				-0.2
146,326	-				+0.8
146,326	-				-2.2
146,342	+				+0.6
146,342	+				+0.6
146,342	+				-0.9
146,342	+				+3.0
146,343	-				-0.6
146,406	+				+0.1
146,427	+				-3.2
146,427	+				+0.8
146,427	+				-0.5
146,427	+				-1.5
146,428	-				-0.8
146,530	+				-0.5
146,617	+				-4.9
146,617	+				-2.3
146,618	-				-0.5
146,625	-				-2.8
146,639	+				-0.9
146,639	+				-1.2
146,640	-				-2.6
146,640	-				-5.0
146,640	-				-0.5
146,640	-				-1.9
146,640	-				-1.7
146,643	+				-5.2
146,644	-				-1.5
146,644	-				-2.0
146,644	-				-1.2
146,670	+				-3.8
146,670	+				-4.5
146,670	+				-0.9
146,670	+				-1.7
146,670	+				-3.3
146,671	-				+1.1
146,671	-				-5.1
146,671	-				-2.6
146,676	+				-2.7
146,676	+				-4.2
146,676	+				-3.3
146,676	+				-1.6
146,677	-				-1.5
146,811	+		ABIE53_000141	0.13	-4.2
146,811	+		ABIE53_000141	0.13	-2.5
146,925	+		ABIE53_000141	0.23	-0.9
146,925	+		ABIE53_000141	0.23	-2.5
146,925	+		ABIE53_000141	0.23	-3.1
146,926	-		ABIE53_000141	0.23	-1.5
146,926	-		ABIE53_000141	0.23	-2.9
146,926	-		ABIE53_000141	0.23	-0.5
146,926	-		ABIE53_000141	0.23	-0.5
146,926	-		ABIE53_000141	0.23	-1.5
146,926	-		ABIE53_000141	0.23	-3.5
146,931	+		ABIE53_000141	0.23	-0.9
146,932	-		ABIE53_000141	0.24	-1.2
147,027	+		ABIE53_000141	0.32	+3.1
147,046	+		ABIE53_000141	0.33	-3.5
147,046	+		ABIE53_000141	0.33	-3.1
147,046	+		ABIE53_000141	0.33	-3.5
147,046	+		ABIE53_000141	0.33	+0.1
147,046	+		ABIE53_000141	0.33	-3.0
147,046	+		ABIE53_000141	0.33	-2.8
147,047	-		ABIE53_000141	0.33	-0.5
147,047	-		ABIE53_000141	0.33	-2.0
147,047	-		ABIE53_000141	0.33	-0.5
147,047	-		ABIE53_000141	0.33	+1.1
147,047	-		ABIE53_000141	0.33	-3.9
147,047	-		ABIE53_000141	0.33	-1.9
147,047	-		ABIE53_000141	0.33	-3.1
147,047	-		ABIE53_000141	0.33	-0.5
147,047	-		ABIE53_000141	0.33	-0.5
147,081	+		ABIE53_000141	0.36	-1.2