Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_3006
Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Furfuryl Alcohol 0.5 % |
---|---|---|---|---|---|
remove | |||||
3,792,740 | + | DvMF_3005 | 0.47 | -0.2 | |
3,792,748 | - | DvMF_3005 | 0.48 | -0.3 | |
3,792,782 | - | DvMF_3005 | 0.50 | -0.8 | |
3,793,271 | - | DvMF_3005 | 0.84 | +0.2 | |
3,793,317 | - | DvMF_3005 | 0.87 | +0.8 | |
3,793,347 | + | DvMF_3005 | 0.89 | -0.7 | |
3,793,354 | + | DvMF_3005 | 0.89 | -0.6 | |
3,794,042 | - | DvMF_3006 | 0.53 | -1.6 | |
3,794,198 | + | DvMF_3006 | 0.72 | -1.1 | |
3,794,653 | + | thiE | DvMF_3007 | 0.36 | -0.8 |
3,794,942 | - | thiE | DvMF_3007 | 0.81 | -0.8 |
3,794,985 | - | thiE | DvMF_3007 | 0.87 | +0.5 |
3,795,080 | - | -0.5 | |||
3,795,129 | - | -0.3 | |||
3,795,200 | + | +0.4 | |||
3,795,221 | + | +0.6 | |||
3,795,221 | + | -0.3 |
Or see this region's nucleotide sequence