Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2771
Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Furfuryl Alcohol 0.5 % |
---|---|---|---|---|---|
remove | |||||
3,503,327 | + | DvMF_2769 | 0.30 | -0.1 | |
3,503,521 | - | DvMF_2769 | 0.58 | -1.0 | |
3,503,536 | - | DvMF_2769 | 0.60 | -1.0 | |
3,503,739 | + | DvMF_2769 | 0.90 | -1.5 | |
3,503,741 | + | -1.4 | |||
3,504,072 | - | DvMF_2770 | 0.37 | +0.7 | |
3,504,180 | + | -0.4 | |||
3,504,237 | - | -1.2 | |||
3,504,335 | + | DvMF_2771 | 0.18 | -1.2 | |
3,504,343 | - | DvMF_2771 | 0.19 | -1.2 | |
3,504,343 | - | DvMF_2771 | 0.19 | -0.4 | |
3,504,400 | - | DvMF_2771 | 0.29 | -0.9 | |
3,504,400 | - | DvMF_2771 | 0.29 | -0.4 | |
3,504,486 | - | DvMF_2771 | 0.43 | -0.5 | |
3,504,600 | + | DvMF_2771 | 0.61 | -0.2 | |
3,504,899 | + | -0.6 | |||
3,504,943 | - | -0.5 | |||
3,504,948 | - | -0.7 | |||
3,504,948 | - | -0.7 | |||
3,504,977 | - | +0.0 | |||
3,505,131 | + | -0.4 | |||
3,505,158 | - | -0.6 | |||
3,505,182 | - | -0.3 | |||
3,505,421 | + | DvMF_2772 | 0.15 | -0.3 | |
3,505,443 | + | DvMF_2772 | 0.16 | +0.2 | |
3,505,509 | - | DvMF_2772 | 0.18 | -0.2 | |
3,505,559 | - | DvMF_2772 | 0.20 | -0.6 | |
3,505,661 | - | DvMF_2772 | 0.25 | -0.5 | |
3,505,676 | - | DvMF_2772 | 0.25 | -0.4 |
Or see this region's nucleotide sequence