Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2702

Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2700 and DvMF_2701 are separated by 6 nucleotidesDvMF_2701 and DvMF_2702 are separated by 2 nucleotidesDvMF_2702 and DvMF_2703 overlap by 4 nucleotides DvMF_2700: DvMF_2700 - glycosyl transferase family 2 (RefSeq), at 3,416,110 to 3,417,864 _2700 DvMF_2701: DvMF_2701 - ABC-2 type transporter (RefSeq), at 3,417,871 to 3,418,695 _2701 DvMF_2702: DvMF_2702 - ABC transporter related (RefSeq), at 3,418,698 to 3,419,981 _2702 DvMF_2703: DvMF_2703 - hypothetical protein (RefSeq), at 3,419,978 to 3,422,101 _2703 Position (kb) 3418 3419 3420Strain fitness (log2 ratio) -3 -2 -1 0 1at 3418.688 kb on + strandat 3418.852 kb on + strand, within DvMF_2702at 3419.855 kb on + strandat 3420.718 kb on - strand, within DvMF_2703

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 %
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3,418,688 + -0.7
3,418,852 + DvMF_2702 0.12 -3.1
3,419,855 + +0.4
3,420,718 - DvMF_2703 0.35 -2.3

Or see this region's nucleotide sequence