Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2698 and DvMF_2699 overlap by 4 nucleotides DvMF_2699 and DvMF_2700 overlap by 1 nucleotides DvMF_2700 and DvMF_2701 are separated by 6 nucleotides DvMF_2701 and DvMF_2702 are separated by 2 nucleotides
DvMF_2698: DvMF_2698 - methyltransferase FkbM family (RefSeq), at 3,413,532 to 3,415,271
_2698
DvMF_2699: DvMF_2699 - glycosyl transferase family 11 (RefSeq), at 3,415,268 to 3,416,110
_2699
DvMF_2700: DvMF_2700 - glycosyl transferase family 2 (RefSeq), at 3,416,110 to 3,417,864
_2700
DvMF_2701: DvMF_2701 - ABC-2 type transporter (RefSeq), at 3,417,871 to 3,418,695
_2701
DvMF_2702: DvMF_2702 - ABC transporter related (RefSeq), at 3,418,698 to 3,419,981
_2702
Position (kb)
3416
3417
3418 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3415.160 kb on + strand at 3415.232 kb on + strand at 3415.744 kb on + strand, within DvMF_2699 at 3416.348 kb on + strand, within DvMF_2700 at 3417.128 kb on - strand, within DvMF_2700 at 3417.141 kb on + strand, within DvMF_2700 at 3417.584 kb on + strand, within DvMF_2700 at 3417.599 kb on - strand, within DvMF_2700 at 3417.685 kb on - strand, within DvMF_2700 at 3418.688 kb on + strand at 3418.852 kb on + strand, within DvMF_2702
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 3,415,160 + -1.8 3,415,232 + -0.9 3,415,744 + DvMF_2699 0.56 -2.2 3,416,348 + DvMF_2700 0.14 -2.6 3,417,128 - DvMF_2700 0.58 -3.2 3,417,141 + DvMF_2700 0.59 -2.4 3,417,584 + DvMF_2700 0.84 -0.6 3,417,599 - DvMF_2700 0.85 -1.4 3,417,685 - DvMF_2700 0.90 -2.0 3,418,688 + -0.7 3,418,852 + DvMF_2702 0.12 -3.1
Or see this region's nucleotide sequence