Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2696

Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2695 and DvMF_2696 are separated by 182 nucleotidesDvMF_2696 and DvMF_2697 overlap by 7 nucleotides DvMF_2695: DvMF_2695 - NAD-dependent epimerase/dehydratase (RefSeq), at 3,410,205 to 3,411,170 _2695 DvMF_2696: DvMF_2696 - glycosyl transferase family 2 (RefSeq), at 3,411,353 to 3,412,444 _2696 DvMF_2697: DvMF_2697 - acyltransferase 3 (RefSeq), at 3,412,438 to 3,413,529 _2697 Position (kb) 3411 3412 3413Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3410.724 kb on - strand, within DvMF_2695at 3411.124 kb on - strandat 3411.411 kb on - strandat 3412.332 kb on - strand, within DvMF_2696at 3412.344 kb on - strandat 3412.972 kb on + strand, within DvMF_2697

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Per-strain Table

Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 %
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3,410,724 - DvMF_2695 0.54 -2.3
3,411,124 - -3.0
3,411,411 - -3.9
3,412,332 - DvMF_2696 0.90 -2.2
3,412,344 - -0.7
3,412,972 + DvMF_2697 0.49 -0.5

Or see this region's nucleotide sequence