Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2667
Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Furfuryl Alcohol 0.5 % |
---|---|---|---|---|---|
remove | |||||
3,369,236 | + | -0.7 | |||
3,369,244 | - | -0.5 | |||
3,369,253 | - | -1.3 | |||
3,369,259 | + | -0.8 | |||
3,369,493 | + | DvMF_2666 | 0.29 | +0.2 | |
3,369,608 | + | DvMF_2666 | 0.56 | -0.1 | |
3,369,652 | + | DvMF_2666 | 0.67 | -0.6 | |
3,369,652 | + | DvMF_2666 | 0.67 | +0.1 | |
3,369,703 | + | DvMF_2666 | 0.79 | -0.4 | |
3,369,705 | + | DvMF_2666 | 0.79 | -0.5 | |
3,369,892 | - | -0.5 | |||
3,369,892 | - | -0.3 | |||
3,370,014 | + | DvMF_2667 | 0.15 | -0.3 | |
3,370,022 | - | DvMF_2667 | 0.16 | -0.8 | |
3,370,022 | - | DvMF_2667 | 0.16 | -0.4 | |
3,370,027 | - | DvMF_2667 | 0.17 | -0.5 | |
3,370,246 | - | DvMF_2667 | 0.39 | -0.7 | |
3,370,393 | + | DvMF_2667 | 0.54 | +0.0 | |
3,370,475 | + | DvMF_2667 | 0.63 | -0.4 | |
3,370,544 | - | DvMF_2667 | 0.70 | -0.4 | |
3,370,549 | - | DvMF_2667 | 0.70 | -0.9 | |
3,370,810 | + | +0.4 | |||
3,370,811 | - | -0.1 | |||
3,370,934 | - | -0.5 | |||
3,371,022 | - | -0.6 | |||
3,371,148 | + | +1.3 | |||
3,371,172 | + | +0.8 | |||
3,371,311 | + | DvMF_2668 | 0.27 | +0.6 |
Or see this region's nucleotide sequence