Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2637 and DvMF_2638 are separated by 36 nucleotides DvMF_2638 and DvMF_2639 are separated by 540 nucleotides
DvMF_2637: DvMF_2637 - diguanylate cyclase with extracellular sensor (RefSeq), at 3,333,700 to 3,335,124
_2637
DvMF_2638: DvMF_2638 - UDP-N-acetylglucosamine 2-epimerase (RefSeq), at 3,335,161 to 3,336,594
_2638
DvMF_2639: DvMF_2639 - hypothetical protein (RefSeq), at 3,337,135 to 3,337,593
_2639
Position (kb)
3335
3336
3337 Strain fitness (log2 ratio)
-2
-1
0
1 at 3334.211 kb on + strand, within DvMF_2637 at 3334.230 kb on + strand, within DvMF_2637 at 3334.238 kb on - strand, within DvMF_2637 at 3334.450 kb on + strand, within DvMF_2637 at 3334.458 kb on - strand, within DvMF_2637 at 3334.633 kb on + strand, within DvMF_2637 at 3334.641 kb on - strand, within DvMF_2637 at 3334.980 kb on + strand, within DvMF_2637 at 3334.980 kb on + strand, within DvMF_2637 at 3334.997 kb on + strand at 3335.061 kb on - strand at 3335.074 kb on + strand at 3335.082 kb on - strand at 3335.082 kb on - strand at 3335.082 kb on - strand at 3335.082 kb on - strand at 3335.305 kb on + strand, within DvMF_2638 at 3335.464 kb on + strand, within DvMF_2638 at 3335.464 kb on + strand, within DvMF_2638 at 3335.725 kb on + strand, within DvMF_2638 at 3335.751 kb on + strand, within DvMF_2638 at 3335.818 kb on - strand, within DvMF_2638 at 3335.956 kb on + strand, within DvMF_2638 at 3336.286 kb on - strand, within DvMF_2638 at 3336.375 kb on + strand, within DvMF_2638 at 3336.422 kb on - strand, within DvMF_2638 at 3336.618 kb on + strand at 3336.673 kb on + strand at 3336.742 kb on - strand at 3336.900 kb on - strand at 3337.006 kb on + strand at 3337.238 kb on - strand, within DvMF_2639 at 3337.253 kb on - strand, within DvMF_2639 at 3337.271 kb on - strand, within DvMF_2639 at 3337.302 kb on - strand, within DvMF_2639
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 3,334,211 + DvMF_2637 0.36 -0.5 3,334,230 + DvMF_2637 0.37 -0.1 3,334,238 - DvMF_2637 0.38 -0.2 3,334,450 + DvMF_2637 0.53 -1.2 3,334,458 - DvMF_2637 0.53 -0.8 3,334,633 + DvMF_2637 0.65 -0.5 3,334,641 - DvMF_2637 0.66 -2.7 3,334,980 + DvMF_2637 0.90 -0.6 3,334,980 + DvMF_2637 0.90 -0.3 3,334,997 + -0.9 3,335,061 - -0.1 3,335,074 + -0.1 3,335,082 - -2.2 3,335,082 - +0.0 3,335,082 - -0.4 3,335,082 - -0.1 3,335,305 + DvMF_2638 0.10 -0.5 3,335,464 + DvMF_2638 0.21 -0.3 3,335,464 + DvMF_2638 0.21 -0.3 3,335,725 + DvMF_2638 0.39 -0.6 3,335,751 + DvMF_2638 0.41 -0.6 3,335,818 - DvMF_2638 0.46 -0.5 3,335,956 + DvMF_2638 0.55 -0.6 3,336,286 - DvMF_2638 0.78 -0.3 3,336,375 + DvMF_2638 0.85 -0.9 3,336,422 - DvMF_2638 0.88 -0.4 3,336,618 + +0.5 3,336,673 + -0.5 3,336,742 - -0.4 3,336,900 - -1.0 3,337,006 + -0.8 3,337,238 - DvMF_2639 0.22 -1.1 3,337,253 - DvMF_2639 0.26 -0.1 3,337,271 - DvMF_2639 0.30 -0.1 3,337,302 - DvMF_2639 0.36 -0.7
Or see this region's nucleotide sequence