Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2503 and DvMF_2504 are separated by 422 nucleotides DvMF_2504 and DvMF_2505 are separated by 63 nucleotides DvMF_2505 and DvMF_2506 are separated by 448 nucleotides
DvMF_2503: DvMF_2503 - putative transcriptional regulator, AsnC family (RefSeq), at 3,156,882 to 3,157,382
_2503
DvMF_2504: DvMF_2504 - no description, at 3,157,805 to 3,158,798
_2504
DvMF_2505: DvMF_2505 - protein of unknown function UPF0047 (RefSeq), at 3,158,862 to 3,159,257
_2505
DvMF_2506: DvMF_2506 - selenocysteine-specific translation elongation factor (RefSeq), at 3,159,706 to 3,161,658
_2506
Position (kb)
3157
3158
3159 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3157.460 kb on - strand at 3157.476 kb on + strand at 3157.624 kb on - strand at 3157.651 kb on - strand at 3157.781 kb on + strand at 3157.781 kb on + strand at 3158.099 kb on + strand, within DvMF_2504 at 3158.280 kb on - strand, within DvMF_2504 at 3158.350 kb on + strand, within DvMF_2504 at 3158.358 kb on - strand, within DvMF_2504 at 3158.358 kb on - strand, within DvMF_2504 at 3158.394 kb on + strand, within DvMF_2504 at 3158.435 kb on + strand, within DvMF_2504 at 3158.499 kb on + strand, within DvMF_2504 at 3158.656 kb on + strand, within DvMF_2504 at 3158.667 kb on + strand, within DvMF_2504 at 3158.708 kb on + strand at 3158.720 kb on + strand at 3158.792 kb on + strand at 3158.855 kb on + strand at 3158.873 kb on - strand at 3158.998 kb on + strand, within DvMF_2505 at 3159.125 kb on + strand, within DvMF_2505 at 3159.139 kb on + strand, within DvMF_2505 at 3159.139 kb on + strand, within DvMF_2505 at 3159.144 kb on + strand, within DvMF_2505 at 3159.265 kb on + strand at 3159.310 kb on + strand at 3159.363 kb on + strand at 3159.450 kb on + strand at 3159.547 kb on - strand at 3159.715 kb on + strand at 3159.744 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 3,157,460 - -0.1 3,157,476 + +0.0 3,157,624 - -0.5 3,157,651 - -0.1 3,157,781 + +0.2 3,157,781 + -0.5 3,158,099 + DvMF_2504 0.30 -2.2 3,158,280 - DvMF_2504 0.48 -2.0 3,158,350 + DvMF_2504 0.55 -1.3 3,158,358 - DvMF_2504 0.56 -3.3 3,158,358 - DvMF_2504 0.56 -2.1 3,158,394 + DvMF_2504 0.59 -1.8 3,158,435 + DvMF_2504 0.63 -0.8 3,158,499 + DvMF_2504 0.70 -2.1 3,158,656 + DvMF_2504 0.86 -2.0 3,158,667 + DvMF_2504 0.87 -1.8 3,158,708 + -1.2 3,158,720 + -1.3 3,158,792 + +0.4 3,158,855 + -0.2 3,158,873 - -0.5 3,158,998 + DvMF_2505 0.34 -0.9 3,159,125 + DvMF_2505 0.66 -0.6 3,159,139 + DvMF_2505 0.70 -0.5 3,159,139 + DvMF_2505 0.70 -0.3 3,159,144 + DvMF_2505 0.71 -0.7 3,159,265 + +0.5 3,159,310 + -0.8 3,159,363 + -1.2 3,159,450 + -0.1 3,159,547 - -0.6 3,159,715 + -0.7 3,159,744 + -0.7
Or see this region's nucleotide sequence