Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2483 and DvMF_2484 are separated by 272 nucleotides DvMF_2484 and DvMF_2485 are separated by 525 nucleotides
DvMF_2483: DvMF_2483 - multi-sensor hybrid histidine kinase (RefSeq), at 3,130,756 to 3,133,971
_2483
DvMF_2484: DvMF_2484 - Phosphoribosylformylglycinamidine synthase (RefSeq), at 3,134,244 to 3,137,258
_2484
DvMF_2485: DvMF_2485 - ABC transporter related (RefSeq), at 3,137,784 to 3,138,614
_2485
Position (kb)
3134
3135
3136
3137
3138 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3133.356 kb on + strand, within DvMF_2483 at 3133.366 kb on + strand, within DvMF_2483 at 3133.371 kb on + strand, within DvMF_2483 at 3133.511 kb on - strand, within DvMF_2483 at 3133.605 kb on - strand, within DvMF_2483 at 3133.634 kb on - strand, within DvMF_2483 at 3133.928 kb on + strand at 3133.928 kb on + strand at 3133.992 kb on + strand at 3134.102 kb on - strand at 3134.181 kb on + strand at 3134.313 kb on - strand at 3134.313 kb on - strand at 3134.594 kb on - strand, within DvMF_2484 at 3134.809 kb on - strand, within DvMF_2484 at 3134.894 kb on + strand, within DvMF_2484 at 3134.958 kb on - strand, within DvMF_2484 at 3135.052 kb on + strand, within DvMF_2484 at 3135.121 kb on - strand, within DvMF_2484 at 3135.156 kb on + strand, within DvMF_2484 at 3135.694 kb on + strand, within DvMF_2484 at 3135.743 kb on - strand, within DvMF_2484 at 3135.743 kb on - strand, within DvMF_2484 at 3135.768 kb on + strand, within DvMF_2484 at 3135.793 kb on - strand, within DvMF_2484 at 3135.960 kb on - strand, within DvMF_2484 at 3136.065 kb on + strand, within DvMF_2484 at 3136.315 kb on - strand, within DvMF_2484 at 3136.504 kb on - strand, within DvMF_2484 at 3136.509 kb on - strand, within DvMF_2484 at 3136.514 kb on - strand, within DvMF_2484 at 3136.691 kb on + strand, within DvMF_2484 at 3136.750 kb on - strand, within DvMF_2484 at 3136.856 kb on - strand, within DvMF_2484 at 3136.856 kb on - strand, within DvMF_2484 at 3136.856 kb on - strand, within DvMF_2484 at 3136.893 kb on + strand, within DvMF_2484 at 3137.600 kb on + strand at 3137.644 kb on - strand at 3137.684 kb on - strand at 3137.707 kb on + strand at 3137.734 kb on + strand at 3137.914 kb on - strand, within DvMF_2485 at 3138.001 kb on + strand, within DvMF_2485 at 3138.131 kb on + strand, within DvMF_2485 at 3138.234 kb on - strand, within DvMF_2485
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 3,133,356 + DvMF_2483 0.81 +0.0 3,133,366 + DvMF_2483 0.81 +0.1 3,133,371 + DvMF_2483 0.81 -0.2 3,133,511 - DvMF_2483 0.86 -0.4 3,133,605 - DvMF_2483 0.89 -0.2 3,133,634 - DvMF_2483 0.89 -0.5 3,133,928 + -0.0 3,133,928 + -1.0 3,133,992 + +0.4 3,134,102 - -0.5 3,134,181 + +0.9 3,134,313 - -1.9 3,134,313 - -2.4 3,134,594 - DvMF_2484 0.12 -2.4 3,134,809 - DvMF_2484 0.19 -2.2 3,134,894 + DvMF_2484 0.22 -2.4 3,134,958 - DvMF_2484 0.24 -2.7 3,135,052 + DvMF_2484 0.27 -2.0 3,135,121 - DvMF_2484 0.29 -2.2 3,135,156 + DvMF_2484 0.30 -1.3 3,135,694 + DvMF_2484 0.48 -3.1 3,135,743 - DvMF_2484 0.50 -1.3 3,135,743 - DvMF_2484 0.50 -2.0 3,135,768 + DvMF_2484 0.51 -2.3 3,135,793 - DvMF_2484 0.51 -2.8 3,135,960 - DvMF_2484 0.57 -1.6 3,136,065 + DvMF_2484 0.60 -2.0 3,136,315 - DvMF_2484 0.69 -3.0 3,136,504 - DvMF_2484 0.75 -3.0 3,136,509 - DvMF_2484 0.75 -2.0 3,136,514 - DvMF_2484 0.75 -3.3 3,136,691 + DvMF_2484 0.81 -0.7 3,136,750 - DvMF_2484 0.83 -2.2 3,136,856 - DvMF_2484 0.87 -2.1 3,136,856 - DvMF_2484 0.87 -2.3 3,136,856 - DvMF_2484 0.87 -0.7 3,136,893 + DvMF_2484 0.88 -1.3 3,137,600 + -0.6 3,137,644 - -0.9 3,137,684 - -0.7 3,137,707 + -0.0 3,137,734 + +0.2 3,137,914 - DvMF_2485 0.16 -0.7 3,138,001 + DvMF_2485 0.26 -1.0 3,138,131 + DvMF_2485 0.42 -0.4 3,138,234 - DvMF_2485 0.54 -0.3
Or see this region's nucleotide sequence