Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2452 and DvMF_2453 are separated by 156 nucleotides DvMF_2453 and DvMF_2454 are separated by 436 nucleotides
DvMF_2452: DvMF_2452 - multi-sensor hybrid histidine kinase (RefSeq), at 3,090,287 to 3,093,820
_2452
DvMF_2453: DvMF_2453 - integral membrane protein MviN (RefSeq), at 3,093,977 to 3,095,767
_2453
DvMF_2454: DvMF_2454 - diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq), at 3,096,204 to 3,098,195
_2454
Position (kb)
3093
3094
3095
3096 Strain fitness (log2 ratio)
-2
-1
0
1 at 3092.991 kb on - strand, within DvMF_2452 at 3092.991 kb on - strand, within DvMF_2452 at 3093.283 kb on + strand, within DvMF_2452 at 3093.291 kb on - strand, within DvMF_2452 at 3093.433 kb on - strand, within DvMF_2452 at 3093.510 kb on + strand at 3093.518 kb on - strand at 3093.673 kb on + strand at 3093.744 kb on + strand at 3094.056 kb on - strand at 3094.079 kb on + strand at 3094.129 kb on - strand at 3094.178 kb on + strand, within DvMF_2453 at 3094.341 kb on - strand, within DvMF_2453 at 3094.612 kb on - strand, within DvMF_2453 at 3094.669 kb on + strand, within DvMF_2453 at 3094.723 kb on + strand, within DvMF_2453 at 3094.731 kb on - strand, within DvMF_2453 at 3094.781 kb on + strand, within DvMF_2453 at 3094.845 kb on + strand, within DvMF_2453 at 3094.845 kb on + strand, within DvMF_2453 at 3094.845 kb on + strand, within DvMF_2453 at 3094.850 kb on + strand, within DvMF_2453 at 3094.996 kb on - strand, within DvMF_2453 at 3095.011 kb on + strand, within DvMF_2453 at 3095.011 kb on + strand, within DvMF_2453 at 3095.019 kb on - strand, within DvMF_2453 at 3095.019 kb on - strand, within DvMF_2453 at 3095.334 kb on - strand, within DvMF_2453 at 3095.392 kb on + strand, within DvMF_2453 at 3095.400 kb on - strand, within DvMF_2453 at 3095.400 kb on - strand, within DvMF_2453 at 3095.429 kb on + strand, within DvMF_2453 at 3095.437 kb on - strand, within DvMF_2453 at 3095.454 kb on - strand, within DvMF_2453 at 3095.567 kb on - strand, within DvMF_2453 at 3095.594 kb on + strand at 3095.720 kb on + strand at 3095.722 kb on - strand at 3095.845 kb on + strand at 3095.845 kb on + strand at 3095.853 kb on - strand at 3095.853 kb on - strand at 3095.853 kb on - strand at 3095.875 kb on + strand at 3096.186 kb on + strand at 3096.468 kb on + strand, within DvMF_2454 at 3096.570 kb on - strand, within DvMF_2454 at 3096.742 kb on + strand, within DvMF_2454 at 3096.763 kb on + strand, within DvMF_2454
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 3,092,991 - DvMF_2452 0.77 -0.4 3,092,991 - DvMF_2452 0.77 +0.0 3,093,283 + DvMF_2452 0.85 -0.3 3,093,291 - DvMF_2452 0.85 -0.3 3,093,433 - DvMF_2452 0.89 -0.3 3,093,510 + -0.4 3,093,518 - -1.0 3,093,673 + -0.1 3,093,744 + +0.0 3,094,056 - -1.1 3,094,079 + -1.2 3,094,129 - -1.3 3,094,178 + DvMF_2453 0.11 -1.0 3,094,341 - DvMF_2453 0.20 +0.8 3,094,612 - DvMF_2453 0.35 -1.5 3,094,669 + DvMF_2453 0.39 -2.2 3,094,723 + DvMF_2453 0.42 -0.1 3,094,731 - DvMF_2453 0.42 -1.4 3,094,781 + DvMF_2453 0.45 -2.1 3,094,845 + DvMF_2453 0.48 -1.6 3,094,845 + DvMF_2453 0.48 -0.9 3,094,845 + DvMF_2453 0.48 -1.5 3,094,850 + DvMF_2453 0.49 -1.9 3,094,996 - DvMF_2453 0.57 -1.1 3,095,011 + DvMF_2453 0.58 -1.5 3,095,011 + DvMF_2453 0.58 -0.9 3,095,019 - DvMF_2453 0.58 -1.5 3,095,019 - DvMF_2453 0.58 -0.9 3,095,334 - DvMF_2453 0.76 -1.0 3,095,392 + DvMF_2453 0.79 -1.0 3,095,400 - DvMF_2453 0.79 -0.9 3,095,400 - DvMF_2453 0.79 -1.2 3,095,429 + DvMF_2453 0.81 -1.0 3,095,437 - DvMF_2453 0.82 -1.0 3,095,454 - DvMF_2453 0.82 -1.2 3,095,567 - DvMF_2453 0.89 -1.8 3,095,594 + -1.5 3,095,720 + -0.4 3,095,722 - -0.5 3,095,845 + +0.3 3,095,845 + -0.5 3,095,853 - -0.7 3,095,853 - -0.4 3,095,853 - -0.4 3,095,875 + -0.4 3,096,186 + +0.0 3,096,468 + DvMF_2454 0.13 +0.3 3,096,570 - DvMF_2454 0.18 -1.5 3,096,742 + DvMF_2454 0.27 +0.3 3,096,763 + DvMF_2454 0.28 +0.3
Or see this region's nucleotide sequence