Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2357
Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Furfuryl Alcohol 0.5 % |
---|---|---|---|---|---|
remove | |||||
2,975,330 | + | -1.5 | |||
2,975,338 | - | -0.8 | |||
2,975,338 | - | -0.6 | |||
2,975,338 | - | -0.9 | |||
2,975,467 | - | +0.2 | |||
2,975,503 | + | -0.3 | |||
2,975,720 | + | DvMF_2356 | 0.12 | -0.5 | |
2,975,819 | - | DvMF_2356 | 0.30 | -0.5 | |
2,975,831 | - | DvMF_2356 | 0.32 | -0.3 | |
2,975,838 | - | DvMF_2356 | 0.33 | -0.8 | |
2,975,970 | - | DvMF_2356 | 0.56 | -0.5 | |
2,976,006 | + | DvMF_2356 | 0.63 | -0.2 | |
2,976,212 | + | -0.1 | |||
2,976,340 | + | +0.5 | |||
2,976,385 | - | +0.5 | |||
2,976,608 | - | DvMF_2357 | 0.23 | -1.4 | |
2,977,046 | + | DvMF_2357 | 0.49 | -0.7 | |
2,977,080 | + | DvMF_2357 | 0.51 | -1.0 | |
2,977,308 | - | DvMF_2357 | 0.65 | -1.4 | |
2,977,337 | + | DvMF_2357 | 0.67 | -1.2 | |
2,977,418 | + | DvMF_2357 | 0.72 | -1.3 | |
2,977,766 | - | -1.2 | |||
2,978,134 | + | -0.4 | |||
2,978,556 | - | DvMF_2358 | 0.27 | -0.7 | |
2,978,583 | - | DvMF_2358 | 0.29 | -0.3 | |
2,978,757 | - | DvMF_2358 | 0.41 | -0.8 | |
2,978,791 | + | DvMF_2358 | 0.43 | -0.3 | |
2,978,791 | + | DvMF_2358 | 0.43 | -0.2 | |
2,978,879 | - | DvMF_2358 | 0.49 | -0.5 |
Or see this region's nucleotide sequence