Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1953 and DvMF_1954 are separated by 95 nucleotides DvMF_1954 and DvMF_1955 are separated by 18 nucleotides DvMF_1955 and DvMF_1956 are separated by 78 nucleotides DvMF_1956 and DvMF_1957 are separated by 611 nucleotides
DvMF_1953: DvMF_1953 - UBA/THIF-type NAD/FAD binding protein (RefSeq), at 2,414,670 to 2,415,680
_1953
DvMF_1954: DvMF_1954 - hypothetical protein (RefSeq), at 2,415,776 to 2,416,114
_1954
DvMF_1955: DvMF_1955 - thiamineS protein (RefSeq), at 2,416,133 to 2,416,360
_1955
DvMF_1956: DvMF_1956 - Aldehyde ferredoxin oxidoreductase (RefSeq), at 2,416,439 to 2,418,166
_1956
DvMF_1957: DvMF_1957 - extracellular solute-binding protein family 1 (RefSeq), at 2,418,778 to 2,419,854
_1957
Position (kb)
2416
2417
2418
2419 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2415.508 kb on - strand, within DvMF_1953 at 2415.784 kb on + strand at 2416.123 kb on - strand at 2416.129 kb on + strand at 2416.157 kb on - strand, within DvMF_1955 at 2416.199 kb on + strand, within DvMF_1955 at 2416.496 kb on - strand at 2416.874 kb on + strand, within DvMF_1956 at 2416.882 kb on - strand, within DvMF_1956 at 2416.966 kb on - strand, within DvMF_1956 at 2416.980 kb on + strand, within DvMF_1956 at 2417.262 kb on - strand, within DvMF_1956 at 2417.563 kb on - strand, within DvMF_1956 at 2417.568 kb on + strand, within DvMF_1956 at 2417.569 kb on - strand, within DvMF_1956 at 2417.576 kb on - strand, within DvMF_1956 at 2417.676 kb on - strand, within DvMF_1956 at 2417.806 kb on - strand, within DvMF_1956 at 2417.859 kb on + strand, within DvMF_1956 at 2418.091 kb on + strand at 2418.175 kb on + strand at 2418.347 kb on + strand at 2418.678 kb on + strand at 2418.924 kb on - strand, within DvMF_1957 at 2418.924 kb on - strand, within DvMF_1957 at 2418.947 kb on - strand, within DvMF_1957 at 2418.949 kb on + strand, within DvMF_1957 at 2419.048 kb on - strand, within DvMF_1957 at 2419.128 kb on - strand, within DvMF_1957
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 2,415,508 - DvMF_1953 0.83 -0.5 2,415,784 + -0.6 2,416,123 - -0.2 2,416,129 + -0.4 2,416,157 - DvMF_1955 0.11 -0.3 2,416,199 + DvMF_1955 0.29 -0.1 2,416,496 - -3.5 2,416,874 + DvMF_1956 0.25 -0.9 2,416,882 - DvMF_1956 0.26 -1.2 2,416,966 - DvMF_1956 0.30 -1.7 2,416,980 + DvMF_1956 0.31 -1.7 2,417,262 - DvMF_1956 0.48 -2.4 2,417,563 - DvMF_1956 0.65 -1.2 2,417,568 + DvMF_1956 0.65 -1.7 2,417,569 - DvMF_1956 0.65 -1.9 2,417,576 - DvMF_1956 0.66 -1.7 2,417,676 - DvMF_1956 0.72 -1.5 2,417,806 - DvMF_1956 0.79 -2.2 2,417,859 + DvMF_1956 0.82 -0.7 2,418,091 + -1.5 2,418,175 + -1.1 2,418,347 + -2.1 2,418,678 + -1.0 2,418,924 - DvMF_1957 0.14 -0.4 2,418,924 - DvMF_1957 0.14 -0.6 2,418,947 - DvMF_1957 0.16 -0.4 2,418,949 + DvMF_1957 0.16 -0.9 2,419,048 - DvMF_1957 0.25 -0.8 2,419,128 - DvMF_1957 0.32 -0.3
Or see this region's nucleotide sequence