Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1647 and DvMF_1648 are separated by 23 nucleotides DvMF_1648 and DvMF_1649 are separated by 10 nucleotides DvMF_1649 and DvMF_1650 are separated by 15 nucleotides DvMF_1650 and DvMF_1651 overlap by 14 nucleotides DvMF_1651 and DvMF_1652 overlap by 1 nucleotides DvMF_1652 and DvMF_1653 are separated by 2 nucleotides
DvMF_1647: DvMF_1647 - no description, at 2,029,036 to 2,029,128
_1647
DvMF_1648: DvMF_1648 - hypothetical protein (RefSeq), at 2,029,152 to 2,029,499
_1648
DvMF_1649: DvMF_1649 - hypothetical protein (RefSeq), at 2,029,510 to 2,029,929
_1649
DvMF_1650: DvMF_1650 - hypothetical protein (RefSeq), at 2,029,945 to 2,030,313
_1650
DvMF_1651: DvMF_1651 - hypothetical protein (RefSeq), at 2,030,300 to 2,030,698
_1651
DvMF_1652: DvMF_1652 - phage head-tail adaptor (RefSeq), at 2,030,698 to 2,031,012
_1652
DvMF_1653: DvMF_1653 - phage conserved hypothetical protein, phiE125 gp8 (RefSeq), at 2,031,015 to 2,031,599
_1653
Position (kb)
2029
2030
2031 Strain fitness (log2 ratio)
-2
-1
0
1 at 2029.025 kb on - strand at 2029.259 kb on - strand, within DvMF_1648 at 2029.430 kb on + strand, within DvMF_1648 at 2029.471 kb on + strand at 2029.626 kb on - strand, within DvMF_1649 at 2030.082 kb on + strand, within DvMF_1650 at 2030.141 kb on + strand, within DvMF_1650 at 2030.144 kb on - strand, within DvMF_1650 at 2030.330 kb on - strand at 2030.743 kb on + strand, within DvMF_1652 at 2030.743 kb on + strand, within DvMF_1652 at 2030.900 kb on + strand, within DvMF_1652 at 2030.917 kb on - strand, within DvMF_1652 at 2031.032 kb on + strand at 2031.108 kb on - strand, within DvMF_1653 at 2031.277 kb on + strand, within DvMF_1653 at 2031.304 kb on - strand, within DvMF_1653 at 2031.310 kb on + strand, within DvMF_1653
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 2,029,025 - -0.6 2,029,259 - DvMF_1648 0.31 -0.6 2,029,430 + DvMF_1648 0.80 -0.2 2,029,471 + -0.6 2,029,626 - DvMF_1649 0.28 -0.4 2,030,082 + DvMF_1650 0.37 -0.7 2,030,141 + DvMF_1650 0.53 -0.1 2,030,144 - DvMF_1650 0.54 -0.9 2,030,330 - -0.7 2,030,743 + DvMF_1652 0.14 +0.5 2,030,743 + DvMF_1652 0.14 -0.3 2,030,900 + DvMF_1652 0.64 -0.8 2,030,917 - DvMF_1652 0.70 -2.2 2,031,032 + +0.3 2,031,108 - DvMF_1653 0.16 -0.5 2,031,277 + DvMF_1653 0.45 -0.3 2,031,304 - DvMF_1653 0.49 -1.0 2,031,310 + DvMF_1653 0.50 +0.5
Or see this region's nucleotide sequence