Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1278 and DvMF_1279 overlap by 4 nucleotides DvMF_1279 and DvMF_1280 overlap by 4 nucleotides DvMF_1280 and DvMF_1281 are separated by 24 nucleotides DvMF_1281 and DvMF_1282 are separated by 129 nucleotides
DvMF_1277: DvMF_1277 - hypothetical protein (RefSeq), at 1,569,143 to 1,569,562
_1277
DvMF_1278: DvMF_1278 - hypothetical protein (RefSeq), at 1,569,516 to 1,569,797
_1278
DvMF_1279: DvMF_1279 - hypothetical protein (RefSeq), at 1,569,794 to 1,570,288
_1279
DvMF_1280: DvMF_1280 - hypothetical protein (RefSeq), at 1,570,285 to 1,570,527
_1280
DvMF_1281: DvMF_1281 - hypothetical protein (RefSeq), at 1,570,552 to 1,571,151
_1281
DvMF_1282: DvMF_1282 - portal protein, putative (RefSeq), at 1,571,281 to 1,572,762
_1282
Position (kb)
1570
1571
1572 Strain fitness (log2 ratio)
-2
-1
0
1 at 1569.624 kb on - strand, within DvMF_1278 at 1569.643 kb on + strand, within DvMF_1278 at 1569.736 kb on + strand, within DvMF_1278 at 1569.953 kb on - strand, within DvMF_1279 at 1569.964 kb on + strand, within DvMF_1279 at 1570.535 kb on - strand at 1570.626 kb on - strand, within DvMF_1281 at 1570.747 kb on + strand, within DvMF_1281 at 1570.845 kb on + strand, within DvMF_1281 at 1571.117 kb on + strand at 1571.400 kb on - strand at 1571.469 kb on + strand, within DvMF_1282 at 1571.649 kb on + strand, within DvMF_1282 at 1571.662 kb on - strand, within DvMF_1282 at 1571.710 kb on - strand, within DvMF_1282 at 1571.710 kb on - strand, within DvMF_1282 at 1571.710 kb on - strand, within DvMF_1282 at 1571.849 kb on + strand, within DvMF_1282 at 1571.854 kb on + strand, within DvMF_1282 at 1571.854 kb on + strand, within DvMF_1282 at 1571.855 kb on + strand, within DvMF_1282 at 1571.862 kb on - strand, within DvMF_1282 at 1571.883 kb on + strand, within DvMF_1282 at 1571.883 kb on + strand, within DvMF_1282 at 1571.891 kb on - strand, within DvMF_1282 at 1571.891 kb on - strand, within DvMF_1282 at 1571.912 kb on - strand, within DvMF_1282 at 1572.082 kb on - strand, within DvMF_1282 at 1572.137 kb on + strand, within DvMF_1282
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 1,569,624 - DvMF_1278 0.38 -0.8 1,569,643 + DvMF_1278 0.45 -0.6 1,569,736 + DvMF_1278 0.78 -0.9 1,569,953 - DvMF_1279 0.32 -0.8 1,569,964 + DvMF_1279 0.34 +0.1 1,570,535 - -1.8 1,570,626 - DvMF_1281 0.12 -1.9 1,570,747 + DvMF_1281 0.33 -1.0 1,570,845 + DvMF_1281 0.49 -0.6 1,571,117 + -1.3 1,571,400 - -0.0 1,571,469 + DvMF_1282 0.13 -0.6 1,571,649 + DvMF_1282 0.25 +0.1 1,571,662 - DvMF_1282 0.26 -0.2 1,571,710 - DvMF_1282 0.29 -0.8 1,571,710 - DvMF_1282 0.29 -1.2 1,571,710 - DvMF_1282 0.29 -1.0 1,571,849 + DvMF_1282 0.38 -0.9 1,571,854 + DvMF_1282 0.39 +0.9 1,571,854 + DvMF_1282 0.39 -0.5 1,571,855 + DvMF_1282 0.39 -0.5 1,571,862 - DvMF_1282 0.39 -0.6 1,571,883 + DvMF_1282 0.41 -1.1 1,571,883 + DvMF_1282 0.41 -0.6 1,571,891 - DvMF_1282 0.41 -0.8 1,571,891 - DvMF_1282 0.41 -0.8 1,571,912 - DvMF_1282 0.43 -0.7 1,572,082 - DvMF_1282 0.54 -0.4 1,572,137 + DvMF_1282 0.58 -0.1
Or see this region's nucleotide sequence