Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_1064
Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | MoYLS4 with Furfuryl Alcohol 0.5 % |
---|---|---|---|---|---|
remove | |||||
1,304,118 | + | DvMF_1062 | 0.82 | -0.4 | |
1,304,126 | - | DvMF_1062 | 0.82 | -1.8 | |
1,304,148 | + | DvMF_1062 | 0.84 | -0.7 | |
1,304,267 | + | -0.3 | |||
1,304,275 | - | -0.4 | |||
1,304,370 | + | -1.1 | |||
1,304,480 | + | -0.7 | |||
1,304,493 | - | -0.1 | |||
1,304,522 | + | -0.6 | |||
1,304,558 | + | DvMF_1063 | 0.12 | +0.5 | |
1,304,583 | - | DvMF_1063 | 0.17 | -0.7 | |
1,304,618 | - | DvMF_1063 | 0.24 | -0.5 | |
1,304,840 | - | DvMF_1063 | 0.67 | -0.1 | |
1,304,950 | + | DvMF_1063 | 0.89 | -0.5 | |
1,305,084 | - | DvMF_1064 | 0.13 | +0.0 | |
1,305,350 | - | DvMF_1064 | 0.59 | -2.1 | |
1,305,434 | + | DvMF_1064 | 0.73 | -0.6 | |
1,305,485 | - | DvMF_1064 | 0.82 | -0.2 | |
1,305,717 | - | -0.2 | |||
1,305,838 | + | -0.6 | |||
1,305,893 | + | -1.9 | |||
1,305,918 | + | -0.5 | |||
1,305,931 | - | -0.0 | |||
1,305,968 | - | DvMF_1065 | 0.10 | -0.7 | |
1,306,082 | + | DvMF_1065 | 0.16 | -0.6 | |
1,306,408 | + | DvMF_1065 | 0.32 | -0.7 | |
1,306,454 | - | DvMF_1065 | 0.34 | +0.2 | |
1,306,479 | - | DvMF_1065 | 0.35 | -0.7 | |
1,306,479 | - | DvMF_1065 | 0.35 | -0.6 |
Or see this region's nucleotide sequence