Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0518 and DvMF_0519 are separated by 76 nucleotides DvMF_0519 and DvMF_0520 are separated by 69 nucleotides DvMF_0520 and DvMF_0521 are separated by 3 nucleotides
DvMF_0518: DvMF_0518 - ABC transporter related (RefSeq), at 611,846 to 612,601
_0518
DvMF_0519: DvMF_0519 - ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein (RefSeq), at 612,678 to 613,742
_0519
DvMF_0520: DvMF_0520 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 613,812 to 614,609
_0520
DvMF_0521: DvMF_0521 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 614,613 to 615,491
_0521
Position (kb) 612
613
614 Strain fitness (log2 ratio) -1
0
1 at 611.687 kb on - strand at 611.788 kb on + strand at 611.934 kb on + strand, within DvMF_0518 at 611.944 kb on + strand, within DvMF_0518 at 612.021 kb on - strand, within DvMF_0518 at 612.069 kb on + strand, within DvMF_0518 at 612.234 kb on + strand, within DvMF_0518 at 612.449 kb on + strand, within DvMF_0518 at 612.476 kb on - strand, within DvMF_0518 at 612.831 kb on + strand, within DvMF_0519 at 612.901 kb on - strand, within DvMF_0519 at 612.915 kb on - strand, within DvMF_0519 at 613.047 kb on - strand, within DvMF_0519 at 613.061 kb on + strand, within DvMF_0519 at 613.137 kb on - strand, within DvMF_0519 at 613.234 kb on - strand, within DvMF_0519 at 613.440 kb on - strand, within DvMF_0519 at 613.529 kb on + strand, within DvMF_0519 at 613.608 kb on + strand, within DvMF_0519 at 613.615 kb on - strand, within DvMF_0519 at 613.616 kb on - strand, within DvMF_0519 at 613.658 kb on + strand at 613.732 kb on - strand at 613.924 kb on - strand, within DvMF_0520 at 614.460 kb on + strand, within DvMF_0520 at 614.525 kb on + strand, within DvMF_0520 at 614.673 kb on - strand at 614.704 kb on + strand, within DvMF_0521 at 614.720 kb on + strand, within DvMF_0521
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 611,687 - -0.6 611,788 + -0.2 611,934 + DvMF_0518 0.12 +0.2 611,944 + DvMF_0518 0.13 -0.4 612,021 - DvMF_0518 0.23 -0.0 612,069 + DvMF_0518 0.29 -0.5 612,234 + DvMF_0518 0.51 -0.5 612,449 + DvMF_0518 0.80 +0.0 612,476 - DvMF_0518 0.83 -0.4 612,831 + DvMF_0519 0.14 -1.1 612,901 - DvMF_0519 0.21 +0.4 612,915 - DvMF_0519 0.22 -0.4 613,047 - DvMF_0519 0.35 -0.8 613,061 + DvMF_0519 0.36 -0.7 613,137 - DvMF_0519 0.43 -0.2 613,234 - DvMF_0519 0.52 -0.5 613,440 - DvMF_0519 0.72 -0.6 613,529 + DvMF_0519 0.80 +0.6 613,608 + DvMF_0519 0.87 +0.1 613,615 - DvMF_0519 0.88 -0.1 613,616 - DvMF_0519 0.88 +0.1 613,658 + +0.4 613,732 - -0.7 613,924 - DvMF_0520 0.14 -1.3 614,460 + DvMF_0520 0.81 -0.3 614,525 + DvMF_0520 0.89 -1.0 614,673 - +0.8 614,704 + DvMF_0521 0.10 +0.1 614,720 + DvMF_0521 0.12 +0.2
Or see this region's nucleotide sequence