Experiment: MoYLS4 with Furfuryl Alcohol 0.5 %
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0045 and DvMF_0046 are separated by 292 nucleotides DvMF_0046 and DvMF_0047 are separated by 68 nucleotides
DvMF_0045: DvMF_0045 - Endonuclease/exonuclease/phosphatase (RefSeq), at 60,152 to 61,366
_0045
DvMF_0046: DvMF_0046 - ornithine carbamoyltransferase (RefSeq), at 61,659 to 62,561
_0046
DvMF_0047: DvMF_0047 - argininosuccinate synthase (RefSeq), at 62,630 to 63,835
_0047
Position (kb) 61
62
63 Strain fitness (log2 ratio) -1
0
1 at 60.661 kb on - strand, within DvMF_0045 at 60.899 kb on + strand, within DvMF_0045 at 60.991 kb on - strand, within DvMF_0045 at 61.267 kb on + strand at 61.308 kb on + strand at 61.451 kb on - strand at 61.762 kb on - strand, within DvMF_0046 at 61.852 kb on - strand, within DvMF_0046 at 61.905 kb on - strand, within DvMF_0046 at 61.960 kb on + strand, within DvMF_0046 at 62.083 kb on + strand, within DvMF_0046 at 62.180 kb on + strand, within DvMF_0046 at 62.180 kb on + strand, within DvMF_0046 at 62.180 kb on + strand, within DvMF_0046 at 62.188 kb on - strand, within DvMF_0046 at 62.188 kb on - strand, within DvMF_0046 at 62.263 kb on + strand, within DvMF_0046 at 62.280 kb on + strand, within DvMF_0046 at 62.617 kb on + strand at 62.741 kb on - strand at 62.945 kb on + strand, within DvMF_0047 at 63.126 kb on + strand, within DvMF_0047 at 63.144 kb on + strand, within DvMF_0047 at 63.144 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.154 kb on + strand, within DvMF_0047 at 63.157 kb on - strand, within DvMF_0047 at 63.162 kb on - strand, within DvMF_0047 at 63.172 kb on - strand, within DvMF_0047 at 63.455 kb on + strand, within DvMF_0047 at 63.468 kb on - strand, within DvMF_0047
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Furfuryl Alcohol 0.5 % remove 60,661 - DvMF_0045 0.42 +0.2 60,899 + DvMF_0045 0.61 -1.0 60,991 - DvMF_0045 0.69 -0.7 61,267 + -0.3 61,308 + -0.2 61,451 - -0.0 61,762 - DvMF_0046 0.11 -1.2 61,852 - DvMF_0046 0.21 -1.7 61,905 - DvMF_0046 0.27 -1.1 61,960 + DvMF_0046 0.33 -0.7 62,083 + DvMF_0046 0.47 -0.8 62,180 + DvMF_0046 0.58 -0.9 62,180 + DvMF_0046 0.58 -1.3 62,180 + DvMF_0046 0.58 -0.9 62,188 - DvMF_0046 0.59 -1.2 62,188 - DvMF_0046 0.59 -0.7 62,263 + DvMF_0046 0.67 -0.2 62,280 + DvMF_0046 0.69 -1.5 62,617 + -0.8 62,741 - -0.6 62,945 + DvMF_0047 0.26 +0.1 63,126 + DvMF_0047 0.41 -1.0 63,144 + DvMF_0047 0.43 -1.0 63,144 + DvMF_0047 0.43 -0.9 63,154 + DvMF_0047 0.43 -1.1 63,154 + DvMF_0047 0.43 -0.2 63,154 + DvMF_0047 0.43 -0.6 63,157 - DvMF_0047 0.44 +0.1 63,162 - DvMF_0047 0.44 -0.6 63,172 - DvMF_0047 0.45 -0.1 63,455 + DvMF_0047 0.68 +0.0 63,468 - DvMF_0047 0.69 +0.3
Or see this region's nucleotide sequence