Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0031 and DVUA0032 are separated by 124 nucleotides DVUA0032 and DVUA0034 are separated by 685 nucleotides
DVUA0031: DVUA0031 - hypothetical protein (TIGR), at 34,717 to 35,583
DVUA0031
DVUA0032: DVUA0032 - hypothetical protein (TIGR), at 35,708 to 36,568
DVUA0032
DVUA0034: DVUA0034 - conserved domain protein (TIGR), at 37,254 to 40,223
DVUA0034
Position (kb)
35
36
37 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 34.714 kb on + strand at 34.714 kb on + strand at 34.714 kb on + strand at 34.722 kb on - strand at 34.745 kb on + strand at 34.792 kb on - strand at 34.804 kb on + strand, within DVUA0031 at 34.835 kb on - strand, within DVUA0031 at 34.999 kb on - strand, within DVUA0031 at 35.006 kb on + strand, within DVUA0031 at 35.024 kb on - strand, within DVUA0031 at 35.066 kb on + strand, within DVUA0031 at 35.112 kb on + strand, within DVUA0031 at 35.122 kb on + strand, within DVUA0031 at 35.145 kb on + strand, within DVUA0031 at 35.153 kb on - strand, within DVUA0031 at 35.177 kb on + strand, within DVUA0031 at 35.195 kb on - strand, within DVUA0031 at 35.213 kb on + strand, within DVUA0031 at 35.272 kb on + strand, within DVUA0031 at 35.309 kb on - strand, within DVUA0031 at 35.369 kb on - strand, within DVUA0031 at 35.489 kb on + strand, within DVUA0031 at 35.497 kb on - strand at 35.543 kb on + strand at 35.561 kb on - strand at 35.586 kb on + strand at 35.609 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.663 kb on + strand at 35.671 kb on - strand at 35.671 kb on - strand at 35.671 kb on - strand at 35.671 kb on - strand at 35.671 kb on - strand at 35.713 kb on - strand at 35.720 kb on - strand at 35.779 kb on + strand at 35.779 kb on + strand at 35.826 kb on + strand, within DVUA0032 at 35.831 kb on + strand, within DVUA0032 at 35.836 kb on + strand, within DVUA0032 at 35.836 kb on + strand, within DVUA0032 at 35.844 kb on - strand, within DVUA0032 at 35.913 kb on - strand, within DVUA0032 at 35.924 kb on + strand, within DVUA0032 at 35.971 kb on + strand, within DVUA0032 at 35.971 kb on + strand, within DVUA0032 at 36.014 kb on - strand, within DVUA0032 at 36.114 kb on + strand, within DVUA0032 at 36.154 kb on + strand, within DVUA0032 at 36.154 kb on + strand, within DVUA0032 at 36.164 kb on + strand, within DVUA0032 at 36.164 kb on + strand, within DVUA0032 at 36.403 kb on + strand, within DVUA0032 at 36.406 kb on - strand, within DVUA0032 at 36.411 kb on - strand, within DVUA0032 at 36.471 kb on + strand, within DVUA0032 at 36.471 kb on + strand, within DVUA0032 at 36.479 kb on - strand, within DVUA0032 at 36.486 kb on + strand at 36.492 kb on + strand at 36.524 kb on + strand at 36.796 kb on + strand at 36.804 kb on - strand at 36.804 kb on - strand at 36.828 kb on + strand at 36.836 kb on - strand at 36.836 kb on - strand at 36.867 kb on + strand at 36.877 kb on + strand at 36.880 kb on + strand at 36.880 kb on + strand at 37.033 kb on + strand at 37.033 kb on + strand at 37.033 kb on + strand at 37.033 kb on + strand at 37.033 kb on + strand at 37.033 kb on + strand at 37.033 kb on + strand at 37.041 kb on - strand at 37.041 kb on - strand at 37.041 kb on - strand at 37.043 kb on - strand at 37.046 kb on - strand at 37.061 kb on - strand at 37.088 kb on + strand at 37.106 kb on - strand at 37.106 kb on - strand at 37.135 kb on + strand at 37.145 kb on + strand at 37.153 kb on - strand at 37.179 kb on + strand at 37.197 kb on - strand at 37.199 kb on - strand at 37.207 kb on - strand at 37.360 kb on + strand at 37.407 kb on + strand at 37.420 kb on + strand at 37.420 kb on - strand at 37.466 kb on - strand at 37.467 kb on + strand at 37.497 kb on + strand at 37.497 kb on + strand at 37.505 kb on - strand at 37.505 kb on - strand at 37.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 34,714 + -0.9 34,714 + -1.2 34,714 + -0.3 34,722 - -0.2 34,745 + -0.8 34,792 - +0.1 34,804 + DVUA0031 0.10 +0.3 34,835 - DVUA0031 0.14 -0.3 34,999 - DVUA0031 0.33 -0.3 35,006 + DVUA0031 0.33 -0.9 35,024 - DVUA0031 0.35 +0.5 35,066 + DVUA0031 0.40 +0.0 35,112 + DVUA0031 0.46 +0.7 35,122 + DVUA0031 0.47 +0.8 35,145 + DVUA0031 0.49 +1.8 35,153 - DVUA0031 0.50 +0.6 35,177 + DVUA0031 0.53 +1.8 35,195 - DVUA0031 0.55 +0.5 35,213 + DVUA0031 0.57 -0.6 35,272 + DVUA0031 0.64 -0.3 35,309 - DVUA0031 0.68 -0.4 35,369 - DVUA0031 0.75 -1.4 35,489 + DVUA0031 0.89 +1.1 35,497 - -1.5 35,543 + +0.5 35,561 - +1.4 35,586 + -0.6 35,609 + -0.7 35,663 + -0.9 35,663 + -0.6 35,663 + +0.3 35,663 + -0.4 35,663 + +0.2 35,663 + +0.0 35,671 - +1.4 35,671 - +0.3 35,671 - +0.1 35,671 - -1.9 35,671 - -1.5 35,713 - -0.7 35,720 - -1.5 35,779 + -0.4 35,779 + -0.4 35,826 + DVUA0032 0.14 -1.1 35,831 + DVUA0032 0.14 -2.4 35,836 + DVUA0032 0.15 -0.4 35,836 + DVUA0032 0.15 -1.2 35,844 - DVUA0032 0.16 -0.0 35,913 - DVUA0032 0.24 -0.0 35,924 + DVUA0032 0.25 -0.6 35,971 + DVUA0032 0.31 -0.5 35,971 + DVUA0032 0.31 -1.2 36,014 - DVUA0032 0.36 +0.6 36,114 + DVUA0032 0.47 -0.1 36,154 + DVUA0032 0.52 -1.3 36,154 + DVUA0032 0.52 -1.1 36,164 + DVUA0032 0.53 -1.4 36,164 + DVUA0032 0.53 -1.0 36,403 + DVUA0032 0.81 +0.5 36,406 - DVUA0032 0.81 -0.3 36,411 - DVUA0032 0.82 +1.1 36,471 + DVUA0032 0.89 -1.8 36,471 + DVUA0032 0.89 -0.4 36,479 - DVUA0032 0.90 -1.0 36,486 + -0.0 36,492 + -0.8 36,524 + -0.9 36,796 + -1.5 36,804 - -2.6 36,804 - +1.6 36,828 + -1.1 36,836 - -0.2 36,836 - -1.2 36,867 + +1.0 36,877 + -0.3 36,880 + +0.5 36,880 + -0.8 37,033 + -0.1 37,033 + +0.6 37,033 + +0.1 37,033 + -0.6 37,033 + -0.0 37,033 + +0.5 37,033 + -0.6 37,041 - +0.8 37,041 - -1.1 37,041 - +0.4 37,043 - -1.3 37,046 - -0.4 37,061 - -0.0 37,088 + +0.2 37,106 - -0.6 37,106 - -1.0 37,135 + +0.3 37,145 + -0.2 37,153 - +1.4 37,179 + +0.3 37,197 - -0.3 37,199 - +0.1 37,207 - +0.2 37,360 + +1.0 37,407 + +0.4 37,420 + -0.7 37,420 - -0.7 37,466 - +1.5 37,467 + -1.3 37,497 + -0.3 37,497 + -0.6 37,505 - +0.1 37,505 - -1.1 37,548 + -0.5
Or see this region's nucleotide sequence