Experiment: MoYLS4 with Zinc Sulfate 1mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2029 and DVU2030 overlap by 4 nucleotides DVU2030 and DORF15105 overlap by 38 nucleotides DORF15105 and DVU2032 are separated by 480 nucleotides
DVU2029: DVU2029 - ISDvu2, transposase OrfA (TIGR), at 2,111,440 to 2,111,838
DVU2029
DVU2030: DVU2030 - ISDvu2, transposase OrfB (TIGR), at 2,111,835 to 2,112,677
DVU2030
DORF15105: DORF15105 - no description, at 2,112,640 to 2,113,482
DORF15105
DVU2032: DVU2032 - ERF family protein (TIGR), at 2,113,963 to 2,114,676
DVU2032
Position (kb)
2112
2113
2114 Strain fitness (log2 ratio)
-2
-1
0
1 at 2112.848 kb on - strand, within DORF15105 at 2112.898 kb on - strand, within DORF15105 at 2113.049 kb on - strand, within DORF15105 at 2113.142 kb on - strand, within DORF15105 at 2113.339 kb on - strand, within DORF15105 at 2113.471 kb on - strand at 2113.591 kb on + strand at 2113.605 kb on + strand at 2113.709 kb on - strand at 2113.711 kb on + strand at 2113.719 kb on - strand at 2113.781 kb on + strand at 2113.781 kb on + strand at 2113.789 kb on - strand at 2113.789 kb on - strand at 2113.801 kb on + strand at 2113.970 kb on + strand at 2113.980 kb on - strand at 2113.980 kb on - strand at 2113.985 kb on + strand at 2113.985 kb on + strand at 2113.993 kb on - strand at 2113.993 kb on - strand at 2114.055 kb on - strand, within DVU2032 at 2114.130 kb on + strand, within DVU2032 at 2114.150 kb on + strand, within DVU2032 at 2114.216 kb on - strand, within DVU2032 at 2114.249 kb on - strand, within DVU2032 at 2114.258 kb on + strand, within DVU2032 at 2114.261 kb on - strand, within DVU2032 at 2114.261 kb on - strand, within DVU2032 at 2114.261 kb on - strand, within DVU2032 at 2114.261 kb on - strand, within DVU2032 at 2114.261 kb on - strand, within DVU2032 at 2114.261 kb on - strand, within DVU2032 at 2114.298 kb on - strand, within DVU2032 at 2114.340 kb on + strand, within DVU2032 at 2114.403 kb on + strand, within DVU2032 at 2114.472 kb on - strand, within DVU2032
Per-strain Table
Position Strand Gene LocusTag Fraction MoYLS4 with Zinc Sulfate 1mM remove 2,112,848 - DORF15105 0.25 -2.3 2,112,898 - DORF15105 0.31 -0.2 2,113,049 - DORF15105 0.49 -0.7 2,113,142 - DORF15105 0.60 -1.2 2,113,339 - DORF15105 0.83 -0.5 2,113,471 - -0.4 2,113,591 + -0.0 2,113,605 + +1.7 2,113,709 - -1.3 2,113,711 + -0.3 2,113,719 - -0.4 2,113,781 + -0.5 2,113,781 + -1.2 2,113,789 - -0.2 2,113,789 - -0.7 2,113,801 + -0.7 2,113,970 + +0.1 2,113,980 - +0.0 2,113,980 - -0.1 2,113,985 + +0.4 2,113,985 + +0.3 2,113,993 - -0.8 2,113,993 - +0.1 2,114,055 - DVU2032 0.13 -0.7 2,114,130 + DVU2032 0.23 -0.3 2,114,150 + DVU2032 0.26 -1.5 2,114,216 - DVU2032 0.35 +0.8 2,114,249 - DVU2032 0.40 -0.5 2,114,258 + DVU2032 0.41 +1.4 2,114,261 - DVU2032 0.42 -0.6 2,114,261 - DVU2032 0.42 -0.3 2,114,261 - DVU2032 0.42 -0.2 2,114,261 - DVU2032 0.42 +0.1 2,114,261 - DVU2032 0.42 -0.8 2,114,261 - DVU2032 0.42 -1.9 2,114,298 - DVU2032 0.47 -0.6 2,114,340 + DVU2032 0.53 -1.3 2,114,403 + DVU2032 0.62 -1.1 2,114,472 - DVU2032 0.71 -1.8
Or see this region's nucleotide sequence