Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4791 and Ac3H11_4792 overlap by 1 nucleotides Ac3H11_4792 and Ac3H11_4793 are separated by 98 nucleotides Ac3H11_4793 and Ac3H11_4794 are separated by 181 nucleotides Ac3H11_4794 and Ac3H11_4795 are separated by 39 nucleotides
Ac3H11_4791 - FAD/FMN-containing dehydrogenases, at 90,837 to 94,754
_4791
Ac3H11_4792 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 94,754 to 95,194
_4792
Ac3H11_4793 - FIG028220: hypothetical protein co-occurring with HEAT repeat protein, at 95,293 to 95,715
_4793
Ac3H11_4794 - Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-), at 95,897 to 96,628
_4794
Ac3H11_4795 - putative membrane protein, at 96,668 to 97,702
_4795
Position (kb) 95
96 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.862 kb on + strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 94.863 kb on - strand, within Ac3H11_4792 at 95.181 kb on + strand at 95.278 kb on + strand at 95.278 kb on + strand at 95.279 kb on - strand at 95.279 kb on - strand at 95.279 kb on - strand at 95.419 kb on + strand, within Ac3H11_4793 at 95.419 kb on + strand, within Ac3H11_4793 at 95.419 kb on + strand, within Ac3H11_4793 at 95.419 kb on + strand, within Ac3H11_4793 at 95.420 kb on - strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.521 kb on + strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.522 kb on - strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.578 kb on + strand, within Ac3H11_4793 at 95.579 kb on - strand, within Ac3H11_4793 at 95.579 kb on - strand, within Ac3H11_4793 at 95.579 kb on - strand, within Ac3H11_4793 at 95.579 kb on - strand, within Ac3H11_4793 at 95.579 kb on - strand, within Ac3H11_4793 at 95.584 kb on + strand, within Ac3H11_4793 at 95.585 kb on - strand, within Ac3H11_4793 at 95.585 kb on - strand, within Ac3H11_4793 at 95.585 kb on - strand, within Ac3H11_4793 at 95.624 kb on - strand, within Ac3H11_4793 at 95.769 kb on - strand at 95.863 kb on + strand at 95.863 kb on + strand at 95.864 kb on - strand at 95.864 kb on - strand at 95.896 kb on + strand at 95.896 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 94,862 + Ac3H11_4792 0.24 +1.0 94,862 + Ac3H11_4792 0.24 +1.3 94,862 + Ac3H11_4792 0.24 -0.6 94,862 + Ac3H11_4792 0.24 -0.5 94,862 + Ac3H11_4792 0.24 -0.9 94,862 + Ac3H11_4792 0.24 +0.3 94,862 + Ac3H11_4792 0.24 -0.2 94,862 + Ac3H11_4792 0.24 +1.0 94,862 + Ac3H11_4792 0.24 -2.5 94,862 + Ac3H11_4792 0.24 -2.9 94,862 + Ac3H11_4792 0.24 +2.1 94,862 + Ac3H11_4792 0.24 -0.3 94,862 + Ac3H11_4792 0.24 +0.7 94,863 - Ac3H11_4792 0.25 -0.0 94,863 - Ac3H11_4792 0.25 +0.3 94,863 - Ac3H11_4792 0.25 -1.8 94,863 - Ac3H11_4792 0.25 +0.4 94,863 - Ac3H11_4792 0.25 +0.6 94,863 - Ac3H11_4792 0.25 +0.5 94,863 - Ac3H11_4792 0.25 +0.8 94,863 - Ac3H11_4792 0.25 +0.7 95,181 + -1.3 95,278 + -0.3 95,278 + -1.9 95,279 - +1.1 95,279 - +1.5 95,279 - +1.5 95,419 + Ac3H11_4793 0.30 -0.3 95,419 + Ac3H11_4793 0.30 +0.6 95,419 + Ac3H11_4793 0.30 +0.1 95,419 + Ac3H11_4793 0.30 -0.6 95,420 - Ac3H11_4793 0.30 +1.0 95,521 + Ac3H11_4793 0.54 +1.5 95,521 + Ac3H11_4793 0.54 +0.1 95,521 + Ac3H11_4793 0.54 +0.5 95,521 + Ac3H11_4793 0.54 -0.8 95,521 + Ac3H11_4793 0.54 +0.4 95,521 + Ac3H11_4793 0.54 -0.9 95,521 + Ac3H11_4793 0.54 -1.0 95,521 + Ac3H11_4793 0.54 -0.6 95,521 + Ac3H11_4793 0.54 -1.8 95,521 + Ac3H11_4793 0.54 +0.7 95,521 + Ac3H11_4793 0.54 -0.5 95,522 - Ac3H11_4793 0.54 -1.0 95,522 - Ac3H11_4793 0.54 -1.1 95,522 - Ac3H11_4793 0.54 +1.4 95,522 - +2.6 95,522 - Ac3H11_4793 0.54 -0.7 95,522 - Ac3H11_4793 0.54 +2.1 95,522 - Ac3H11_4793 0.54 -0.7 95,522 - Ac3H11_4793 0.54 +0.7 95,522 - Ac3H11_4793 0.54 +0.9 95,522 - Ac3H11_4793 0.54 +0.1 95,522 - Ac3H11_4793 0.54 +2.5 95,578 + Ac3H11_4793 0.67 -0.3 95,578 + Ac3H11_4793 0.67 -0.3 95,578 + Ac3H11_4793 0.67 -1.0 95,578 + Ac3H11_4793 0.67 +0.1 95,578 + Ac3H11_4793 0.67 +3.6 95,578 + Ac3H11_4793 0.67 +1.0 95,578 + Ac3H11_4793 0.67 -0.5 95,579 - Ac3H11_4793 0.68 -0.4 95,579 - Ac3H11_4793 0.68 -1.3 95,579 - Ac3H11_4793 0.68 +0.4 95,579 - Ac3H11_4793 0.68 +1.6 95,579 - Ac3H11_4793 0.68 +0.3 95,584 + Ac3H11_4793 0.69 -0.4 95,585 - Ac3H11_4793 0.69 +0.4 95,585 - Ac3H11_4793 0.69 +1.4 95,585 - Ac3H11_4793 0.69 +1.4 95,624 - Ac3H11_4793 0.78 -0.9 95,769 - +1.6 95,863 + -0.4 95,863 + -0.1 95,864 - +7.4 95,864 - +6.9 95,896 + +1.6 95,896 + -0.8
Or see this region's nucleotide sequence