Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4747 and Ac3H11_4748 are separated by 183 nucleotides Ac3H11_4748 and Ac3H11_4749 are separated by 135 nucleotides Ac3H11_4749 and Ac3H11_4750 are separated by 1 nucleotides Ac3H11_4750 and Ac3H11_4751 overlap by 4 nucleotides
Ac3H11_4747 - 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262), at 49,449 to 50,477
_4747
Ac3H11_4748 - Large-conductance mechanosensitive channel, at 50,661 to 51,092
_4748
Ac3H11_4749 - hypothetical protein, at 51,228 to 51,431
_4749
Ac3H11_4750 - Ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2), at 51,433 to 51,843
_4750
Ac3H11_4751 - Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2), at 51,840 to 53,270
_4751
Position (kb)
51
52 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4
5 at 50.476 kb on - strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.507 kb on + strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.508 kb on - strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.528 kb on + strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.529 kb on - strand at 50.658 kb on + strand at 50.659 kb on - strand at 50.659 kb on - strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.662 kb on + strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 50.663 kb on - strand at 51.796 kb on + strand, within Ac3H11_4750 at 51.796 kb on + strand, within Ac3H11_4750
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 50,476 - -1.1 50,507 + -1.4 50,507 + -0.6 50,507 + +1.6 50,507 + -0.2 50,508 - +0.6 50,508 - +4.8 50,508 - +1.1 50,508 - +1.0 50,508 - -0.1 50,508 - -0.0 50,528 + +2.6 50,528 + +0.6 50,528 + +1.0 50,528 + -0.2 50,528 + -0.9 50,528 + -1.1 50,528 + +1.2 50,528 + -1.8 50,528 + -1.3 50,528 + +1.4 50,528 + -0.4 50,529 - +2.6 50,529 - +0.4 50,529 - +0.6 50,529 - -0.0 50,529 - -0.2 50,529 - -0.1 50,529 - -1.1 50,529 - +0.2 50,529 - +0.9 50,529 - +0.7 50,529 - -1.0 50,529 - +1.1 50,529 - +0.7 50,529 - -0.7 50,529 - +0.3 50,658 + +2.9 50,659 - +3.2 50,659 - -1.4 50,662 + +1.5 50,662 + +1.2 50,662 + -0.7 50,662 + -0.7 50,662 + +0.4 50,662 + +1.6 50,662 + -0.5 50,662 + -0.3 50,662 + +2.1 50,662 + +1.6 50,662 + +0.6 50,662 + -0.2 50,662 + -0.3 50,662 + +0.3 50,663 - -0.4 50,663 - -0.2 50,663 - +2.1 50,663 - -0.7 50,663 - -0.0 50,663 - +0.3 50,663 - -0.2 50,663 - -0.2 50,663 - -0.8 50,663 - +0.7 50,663 - +0.3 51,796 + Ac3H11_4750 0.88 +1.1 51,796 + Ac3H11_4750 0.88 +1.1
Or see this region's nucleotide sequence