Experiment: D-Cycloserine 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Ac3H11_4593 and Ac3H11_4594 are separated by 74 nucleotides Ac3H11_4594 and Ac3H11_4595 are separated by 38 nucleotides Ac3H11_4595 and Ac3H11_4596 are separated by 200 nucleotides
Ac3H11_4593 - hypothetical protein, at 194,996 to 195,289
_4593
Ac3H11_4594 - hypothetical protein, at 195,364 to 195,705
_4594
Ac3H11_4595 - Copper tolerance protein, at 195,744 to 196,064
_4595
Ac3H11_4596 - Multicopper oxidase, at 196,265 to 197,677
_4596
Position (kb) 195
196
197 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 194.763 kb on + strand at 194.763 kb on + strand at 194.764 kb on - strand at 194.764 kb on - strand at 194.764 kb on - strand at 194.764 kb on - strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.873 kb on + strand at 194.874 kb on - strand at 194.874 kb on - strand at 194.874 kb on - strand at 194.901 kb on + strand at 194.902 kb on - strand at 194.902 kb on - strand at 194.913 kb on + strand at 194.913 kb on + strand at 194.913 kb on + strand at 194.914 kb on - strand at 194.914 kb on - strand at 194.958 kb on + strand at 194.998 kb on - strand at 194.998 kb on - strand at 194.998 kb on - strand at 194.998 kb on - strand at 195.002 kb on - strand at 195.002 kb on - strand at 195.002 kb on - strand at 195.205 kb on + strand, within Ac3H11_4593 at 195.205 kb on + strand, within Ac3H11_4593 at 195.205 kb on + strand, within Ac3H11_4593 at 195.205 kb on + strand, within Ac3H11_4593 at 195.206 kb on - strand, within Ac3H11_4593 at 195.206 kb on - strand, within Ac3H11_4593 at 195.206 kb on - strand, within Ac3H11_4593 at 195.207 kb on + strand, within Ac3H11_4593 at 195.207 kb on + strand, within Ac3H11_4593 at 195.208 kb on - strand, within Ac3H11_4593 at 195.208 kb on - strand, within Ac3H11_4593 at 195.208 kb on - strand, within Ac3H11_4593 at 195.274 kb on + strand at 195.274 kb on + strand at 195.275 kb on - strand at 195.275 kb on - strand at 195.275 kb on - strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.303 kb on + strand at 195.304 kb on - strand at 195.304 kb on - strand at 195.304 kb on - strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.313 kb on + strand at 195.314 kb on - strand at 195.314 kb on - strand at 195.314 kb on - strand at 195.359 kb on + strand at 195.359 kb on + strand at 195.359 kb on + strand at 195.359 kb on + strand at 195.360 kb on - strand at 195.360 kb on - strand at 195.365 kb on + strand at 195.365 kb on + strand at 195.365 kb on + strand at 195.366 kb on - strand at 195.366 kb on - strand at 195.366 kb on - strand at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.505 kb on + strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.506 kb on - strand, within Ac3H11_4594 at 195.565 kb on + strand, within Ac3H11_4594 at 195.565 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.582 kb on + strand, within Ac3H11_4594 at 195.583 kb on - strand, within Ac3H11_4594 at 195.583 kb on - strand, within Ac3H11_4594 at 195.583 kb on - strand, within Ac3H11_4594 at 195.705 kb on + strand at 195.705 kb on + strand at 195.705 kb on + strand at 195.728 kb on + strand at 195.728 kb on + strand at 195.728 kb on + strand at 195.729 kb on - strand at 195.729 kb on - strand at 195.729 kb on - strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.745 kb on + strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.746 kb on - strand at 195.928 kb on + strand, within Ac3H11_4595 at 195.928 kb on + strand, within Ac3H11_4595 at 195.928 kb on + strand, within Ac3H11_4595 at 195.928 kb on + strand, within Ac3H11_4595 at 195.992 kb on + strand, within Ac3H11_4595 at 195.992 kb on + strand, within Ac3H11_4595 at 195.992 kb on + strand, within Ac3H11_4595 at 195.996 kb on + strand, within Ac3H11_4595 at 195.996 kb on + strand, within Ac3H11_4595 at 195.996 kb on + strand, within Ac3H11_4595 at 195.997 kb on - strand, within Ac3H11_4595 at 195.997 kb on - strand, within Ac3H11_4595 at 196.007 kb on + strand, within Ac3H11_4595 at 196.008 kb on - strand, within Ac3H11_4595 at 196.008 kb on - strand, within Ac3H11_4595 at 196.087 kb on - strand at 196.087 kb on - strand at 196.100 kb on + strand at 196.101 kb on - strand at 196.113 kb on + strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.114 kb on - strand at 196.158 kb on - strand at 196.173 kb on - strand at 196.173 kb on - strand at 196.173 kb on - strand at 196.229 kb on + strand at 196.229 kb on + strand at 196.229 kb on + strand at 196.229 kb on + strand at 196.230 kb on - strand at 196.230 kb on - strand at 196.230 kb on - strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.233 kb on + strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.234 kb on - strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.238 kb on + strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.239 kb on - strand at 196.393 kb on - strand at 196.398 kb on + strand at 196.399 kb on - strand at 196.425 kb on + strand, within Ac3H11_4596 at 196.426 kb on - strand, within Ac3H11_4596 at 196.426 kb on - strand, within Ac3H11_4596 at 196.469 kb on + strand, within Ac3H11_4596 at 196.608 kb on + strand, within Ac3H11_4596 at 196.608 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.800 kb on + strand, within Ac3H11_4596 at 196.801 kb on - strand, within Ac3H11_4596 at 196.801 kb on - strand, within Ac3H11_4596
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cycloserine 0.05 mg/ml remove 194,763 + -3.1 194,763 + -2.1 194,764 - -0.9 194,764 - -0.5 194,764 - -0.7 194,764 - +0.4 194,873 + -0.1 194,873 + -1.7 194,873 + -0.2 194,873 + +0.1 194,873 + -0.7 194,874 - -0.2 194,874 - -1.1 194,874 - +0.7 194,901 + -0.1 194,902 - -2.3 194,902 - +0.1 194,913 + -2.0 194,913 + -1.5 194,913 + -1.2 194,914 - +0.8 194,914 - +0.3 194,958 + -0.7 194,998 - +0.3 194,998 - -2.6 194,998 - -1.5 194,998 - +1.1 195,002 - -0.8 195,002 - +0.6 195,002 - -0.9 195,205 + Ac3H11_4593 0.71 +0.1 195,205 + Ac3H11_4593 0.71 -0.3 195,205 + Ac3H11_4593 0.71 -1.0 195,205 + Ac3H11_4593 0.71 +0.1 195,206 - Ac3H11_4593 0.71 -0.1 195,206 - Ac3H11_4593 0.71 -0.5 195,206 - Ac3H11_4593 0.71 +1.2 195,207 + Ac3H11_4593 0.72 +0.5 195,207 + Ac3H11_4593 0.72 +0.3 195,208 - Ac3H11_4593 0.72 -0.0 195,208 - Ac3H11_4593 0.72 +1.3 195,208 - Ac3H11_4593 0.72 +0.2 195,274 + +0.1 195,274 + -0.8 195,275 - +1.1 195,275 - -0.5 195,275 - +0.4 195,303 + -0.4 195,303 + +1.6 195,303 + -1.0 195,303 + +1.9 195,303 + -0.4 195,304 - -0.7 195,304 - +0.5 195,304 - +1.8 195,313 + -0.7 195,313 + +2.0 195,313 + -1.3 195,313 + +0.7 195,313 + -0.1 195,314 - +1.3 195,314 - -1.8 195,314 - +0.9 195,359 + +0.9 195,359 + -1.6 195,359 + -2.3 195,359 + +0.5 195,360 - +0.4 195,360 - -1.3 195,365 + +0.5 195,365 + +0.4 195,365 + -0.2 195,366 - -1.6 195,366 - +1.4 195,366 - -1.0 195,505 + Ac3H11_4594 0.41 +0.2 195,505 + Ac3H11_4594 0.41 -0.3 195,505 + Ac3H11_4594 0.41 +0.4 195,505 + Ac3H11_4594 0.41 -1.0 195,505 + Ac3H11_4594 0.41 +0.6 195,505 + Ac3H11_4594 0.41 -0.7 195,505 + Ac3H11_4594 0.41 +0.4 195,505 + Ac3H11_4594 0.41 +0.9 195,505 + Ac3H11_4594 0.41 -2.0 195,506 - Ac3H11_4594 0.42 +1.1 195,506 - Ac3H11_4594 0.42 +1.6 195,506 - Ac3H11_4594 0.42 +1.5 195,506 - Ac3H11_4594 0.42 +0.9 195,565 + Ac3H11_4594 0.59 +0.1 195,565 + Ac3H11_4594 0.59 -1.8 195,582 + Ac3H11_4594 0.64 +0.2 195,582 + Ac3H11_4594 0.64 -0.6 195,582 + Ac3H11_4594 0.64 +0.2 195,582 + Ac3H11_4594 0.64 -1.7 195,582 + Ac3H11_4594 0.64 -0.0 195,582 + Ac3H11_4594 0.64 +3.4 195,582 + Ac3H11_4594 0.64 +0.6 195,582 + Ac3H11_4594 0.64 +1.1 195,583 - Ac3H11_4594 0.64 -0.1 195,583 - Ac3H11_4594 0.64 -2.0 195,583 - Ac3H11_4594 0.64 -1.7 195,705 + -1.3 195,705 + +0.0 195,705 + -1.7 195,728 + -2.8 195,728 + -3.0 195,728 + -1.1 195,729 - -1.7 195,729 - +0.3 195,729 - +0.7 195,745 + -0.9 195,745 + +1.1 195,745 + -0.4 195,745 + +0.3 195,745 + -0.9 195,745 + -0.3 195,745 + -1.3 195,746 - +0.1 195,746 - +0.3 195,746 - +1.7 195,746 - -0.1 195,746 - -1.1 195,928 + Ac3H11_4595 0.57 +1.2 195,928 + Ac3H11_4595 0.57 +0.4 195,928 + Ac3H11_4595 0.57 +1.0 195,928 + Ac3H11_4595 0.57 +0.3 195,992 + Ac3H11_4595 0.77 +0.2 195,992 + Ac3H11_4595 0.77 +0.5 195,992 + Ac3H11_4595 0.77 -0.0 195,996 + Ac3H11_4595 0.79 +2.7 195,996 + Ac3H11_4595 0.79 -0.8 195,996 + Ac3H11_4595 0.79 +0.3 195,997 - Ac3H11_4595 0.79 -1.1 195,997 - Ac3H11_4595 0.79 -0.2 196,007 + Ac3H11_4595 0.82 -0.4 196,008 - Ac3H11_4595 0.82 +1.8 196,008 - Ac3H11_4595 0.82 +1.7 196,087 - +1.3 196,087 - -1.2 196,100 + +0.5 196,101 - +1.4 196,113 + -0.9 196,114 - +0.3 196,114 - +1.3 196,114 - -0.3 196,114 - -0.7 196,114 - -0.8 196,158 - -0.4 196,173 - -0.8 196,173 - -0.8 196,173 - -0.5 196,229 + -1.4 196,229 + -0.9 196,229 + -0.5 196,229 + +0.7 196,230 - +0.7 196,230 - +0.2 196,230 - +1.4 196,233 + -1.6 196,233 + +1.5 196,233 + +0.3 196,233 + -1.0 196,233 + -0.2 196,233 + -1.0 196,234 - -0.7 196,234 - +0.9 196,234 - -1.0 196,234 - -2.2 196,234 - -0.1 196,234 - +0.4 196,234 - +2.7 196,234 - -0.3 196,234 - -0.5 196,238 + +0.6 196,238 + -0.0 196,238 + -0.2 196,238 + +1.0 196,238 + -1.0 196,238 + -0.1 196,239 - +0.2 196,239 - -0.9 196,239 - -1.9 196,239 - -1.0 196,239 - -1.7 196,239 - -0.3 196,239 - +0.1 196,239 - +1.4 196,393 - -1.6 196,398 + +1.4 196,399 - +0.1 196,425 + Ac3H11_4596 0.11 -2.3 196,426 - Ac3H11_4596 0.11 -0.5 196,426 - Ac3H11_4596 0.11 -0.9 196,469 + Ac3H11_4596 0.14 -0.6 196,608 + Ac3H11_4596 0.24 -0.8 196,608 + Ac3H11_4596 0.24 -0.7 196,800 + Ac3H11_4596 0.38 -0.1 196,800 + Ac3H11_4596 0.38 +0.6 196,800 + Ac3H11_4596 0.38 +0.4 196,800 + Ac3H11_4596 0.38 -0.6 196,801 - Ac3H11_4596 0.38 +0.8 196,801 - Ac3H11_4596 0.38 +2.6
Or see this region's nucleotide sequence